RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 MKNK2Q9HBH9 465 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 SAP30BPQ9UHR5 308 aaKnown RBP10.24□□□□□ -0.77
CCDC66-216ENST00000476142 TUBE1Q9UJT0 475 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 LEMD3Q9Y2U8 911 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 AFF2P51816 1311 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 CASZ1Q86V15 1759 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 FAM237AA0A1B0GTK4 181 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 SKILP12757 684 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 GPSM2P81274 684 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 TFAP4Q01664 338 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 ZNF174Q15697 407 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 NOM1Q5C9Z4 860 aaKnown RBP10.24□□□□□ -0.77
CCDC66-216ENST00000476142 USP49Q70CQ1 688 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 AMOTL1Q8IY63 956 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 MYRIPQ8NFW9 859 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 KAT14Q9H8E8 782 aa10.24□□□□□ -0.77
CCDC66-216ENST00000476142 SERPINC1P01008 464 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 ATP1A3P13637 1013 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 NLRP5P59047 1200 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 ST5P78524 1137 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 NCAPHQ15003 741 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 POSTNQ15063 836 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 HSP90AA4PQ58FG1 418 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 FOXP4Q8IVH2 680 aaPredicted RBP10.23□□□□□ -0.77
CCDC66-216ENST00000476142 MAPKAPK5Q8IW41 473 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 TGFBRAP1Q8WUH2 860 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 SRPRBQ9Y5M8 271 aaKnown RBP10.23□□□□□ -0.77
CCDC66-216ENST00000476142 TNRC6CQ9HCJ0 1690 aaKnown RBP10.23□□□□□ -0.77
CCDC66-216ENST00000476142 DYNC1I1O14576 645 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 BAG3O95817 575 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 GSTO1P78417 241 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 FANCCQ00597 558 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 MYL5Q02045 173 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 ZNF827Q17R98 1081 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 SBK1Q52WX2 424 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 DHX58Q96C10 678 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 NHSQ6T4R5 1651 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 CNTNAP5Q8WYK1 1306 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 IRS2Q9Y4H2 1338 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 COL24A1Q17RW2 1714 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 MYH2Q9UKX2 1941 aa10.23□□□□□ -0.77
CCDC66-216ENST00000476142 USP17L3A6NCW0 530 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 USP17L4A6NCW7 530 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 NEMFO60524 1076 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 USP17L1Q7RTZ2 530 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 ZNF592Q92610 1267 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 WNT7AO00755 349 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 IKBKBO14920 756 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 SERPINB2P05120 415 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 TSPY3P0CV98 308 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 TSPY8P0CW00 308 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 SCG2P13521 617 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 C12orf60Q5U649 245 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 PIK3AP1Q6ZUJ8 805 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 SMARCE1Q969G3 411 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 EPSTI1Q96J88 318 aa10.22□□□□□ -0.77
CCDC66-216ENST00000476142 TRMT1Q9NXH9 659 aaKnown RBP10.22□□□□□ -0.77
CCDC66-216ENST00000476142 TNNT1P13805 278 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
CCDC66-216ENST00000476142 VEGFAP15692 232 aaPredicted RBP10.21□□□□□ -0.77
CCDC66-216ENST00000476142 KIF5BP33176 963 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 AFMP43652 599 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 GSDMDP57764 484 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 PTPN21Q16825 1174 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 CFAP100Q494V2 611 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 TTC38Q5R3I4 469 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 GPKOWQ92917 476 aaPredicted RBP eCLIP10.21□□□□□ -0.77
CCDC66-216ENST00000476142 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
CCDC66-216ENST00000476142 GGA1Q9UJY5 639 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 MAN1B1Q9UKM7 699 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 MYH13Q9UKX3 1938 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 THSD7AQ9UPZ6 1657 aa10.21□□□□□ -0.77
CCDC66-216ENST00000476142 VWA3AA6NCI4 1184 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 USP27XA6NNY8 438 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.78
CCDC66-216ENST00000476142 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.78
CCDC66-216ENST00000476142 GYS1P13807 737 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 BTDP43251 543 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 UBASH3AP57075 661 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 MDM2Q00987 491 aaPredicted RBP10.21□□□□□ -0.78
CCDC66-216ENST00000476142 RCSD1Q6JBY9 416 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 ZNF444Q8N0Y2 327 aaPredicted RBP10.21□□□□□ -0.78
CCDC66-216ENST00000476142 ZNF579Q8NAF0 562 aaKnown RBP10.21□□□□□ -0.78
CCDC66-216ENST00000476142 PNMA1Q8ND90 353 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 RBM17Q96I25 401 aaKnown RBP10.21□□□□□ -0.78
CCDC66-216ENST00000476142 ARID3AQ99856 593 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 FANCLQ9NW38 375 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 STX8Q9UNK0 236 aa10.21□□□□□ -0.78
CCDC66-216ENST00000476142 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 LDHCP07864 332 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 BMP6P22004 513 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 MCM7P33993 719 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 PLCD1P51178 756 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 CCZ1BP86790 482 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 CCZ1P86791 482 aaPredicted RBP10.2□□□□□ -0.78
CCDC66-216ENST00000476142 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
CCDC66-216ENST00000476142 IL17RBQ9NRM6 502 aa10.2□□□□□ -0.78
CCDC66-216ENST00000476142 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms