RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
ABCF3-211ENST00000475728 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
ABCF3-211ENST00000475728 R3HDMLQ9H3Y0 253 aa17.22■□□□□ 0.35
ABCF3-211ENST00000475728 EVX2Q03828 476 aa17.21■□□□□ 0.35
ABCF3-211ENST00000475728 PDE4BQ07343 736 aa17.21■□□□□ 0.35
ABCF3-211ENST00000475728 CTU1Q7Z7A3 348 aaKnown RBP17.21■□□□□ 0.35
ABCF3-211ENST00000475728 KIAA1683Q9H0B3 1180 aa17.21■□□□□ 0.35
ABCF3-211ENST00000475728 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
ABCF3-211ENST00000475728 ATAD5Q96QE3 1844 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
ABCF3-211ENST00000475728 OSBPP22059 807 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 PPARAQ07869 468 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 KIF22Q14807 665 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 SEPT2Q15019 361 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 PKN2Q16513 984 aaKnown RBP17.2■□□□□ 0.34
ABCF3-211ENST00000475728 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-211ENST00000475728 CWC27Q6UX04 472 aaKnown RBP17.2■□□□□ 0.34
ABCF3-211ENST00000475728 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 ZMYM6O95789 1325 aa17.2■□□□□ 0.34
ABCF3-211ENST00000475728 AKR1B1P15121 316 aa17.19■□□□□ 0.34
ABCF3-211ENST00000475728 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
ABCF3-211ENST00000475728 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-211ENST00000475728 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-211ENST00000475728 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
ABCF3-211ENST00000475728 KANSL2Q9H9L4 492 aa17.19■□□□□ 0.34
ABCF3-211ENST00000475728 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
ABCF3-211ENST00000475728 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
ABCF3-211ENST00000475728 RAD50Q92878 1312 aa17.19■□□□□ 0.34
ABCF3-211ENST00000475728 HSPD1P10809 573 aaKnown RBP17.18■□□□□ 0.34
ABCF3-211ENST00000475728 RASA1P20936 1047 aa17.18■□□□□ 0.34
ABCF3-211ENST00000475728 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-211ENST00000475728 IRX3P78415 501 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-211ENST00000475728 ICA1Q05084 483 aa17.18■□□□□ 0.34
ABCF3-211ENST00000475728 TREML2Q5T2D2 321 aa17.18■□□□□ 0.34
ABCF3-211ENST00000475728 VPS53Q5VIR6 699 aa17.18■□□□□ 0.34
ABCF3-211ENST00000475728 PRPF38BQ5VTL8 546 aaKnown RBP17.18■□□□□ 0.34
ABCF3-211ENST00000475728 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-211ENST00000475728 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
ABCF3-211ENST00000475728 CYP2C8P10632 490 aa17.17■□□□□ 0.34
ABCF3-211ENST00000475728 GCLCP48506 637 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-211ENST00000475728 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
ABCF3-211ENST00000475728 C17orf99Q6UX52 265 aa17.17■□□□□ 0.34
ABCF3-211ENST00000475728 GTF3C2Q8WUA4 911 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-211ENST00000475728 EMILIN3Q9NT22 766 aa17.17■□□□□ 0.34
ABCF3-211ENST00000475728 ADGRA2Q96PE1 1338 aa17.17■□□□□ 0.34
ABCF3-211ENST00000475728 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 FOXP2O15409 715 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 FGAP02671 866 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
ABCF3-211ENST00000475728 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 ACER1Q8TDN7 264 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 LPAR1Q92633 364 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 CPA4Q9UI42 421 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L15C9J2P7 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L13C9JLJ4 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L11C9JVI0 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L18D6R9N7 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L22D6RA61 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L17D6RBQ6 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L19D6RCP7 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L20D6RJB6 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 GNRH1P01148 92 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 TSPY3P0CV98 308 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 TSPY8P0CW00 308 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 USP17L24Q0WX57 530 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
ABCF3-211ENST00000475728 CD99L2Q8TCZ2 262 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 ASCC2Q9H1I8 757 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-211ENST00000475728 EFCC1Q9HA90 598 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 PTPRFP10586 1907 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 LOC285556D6RIA3 1793 aa17.15■□□□□ 0.34
ABCF3-211ENST00000475728 BCRP11274 1271 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 CHMLP26374 656 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 NT5C2P49902 561 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 LACTBP83111 547 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-211ENST00000475728 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 NYAP2Q9P242 653 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 TRIM17Q9Y577 477 aa17.14■□□□□ 0.33
ABCF3-211ENST00000475728 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 ORC4O43929 436 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 PRDM1O75626 825 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
ABCF3-211ENST00000475728 VCAM1P19320 739 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 PRMT2P55345 433 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 FBXO46Q6PJ61 603 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-211ENST00000475728 OTOP1Q7RTM1 612 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 NEDD1Q8NHV4 660 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-211ENST00000475728 GOPCQ9HD26 462 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 SYNPO2Q9UMS6 1093 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABCF3-211ENST00000475728 PLIN4Q96Q06 1357 aa17.13■□□□□ 0.33
ABCF3-211ENST00000475728 ZNF213O14771 459 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms