RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 NCKAP5LQ9HCH0 1330 aa19.67■□□□□ 0.74
LPCAT1-202ENST00000475622 BCRP11274 1271 aa19.67■□□□□ 0.74
LPCAT1-202ENST00000475622 ADKP55263 362 aaKnown RBP19.67■□□□□ 0.74
LPCAT1-202ENST00000475622 MYO1AQ9UBC5 1043 aa19.67■□□□□ 0.74
LPCAT1-202ENST00000475622 GIPC1O14908 333 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 DKC1O60832 514 aaKnown RBP eCLIP19.66■□□□□ 0.741e-7■■■■■ 102
LPCAT1-202ENST00000475622 CD19P15391 556 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 TRAPPC3LQ5T215 181 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 MRPL44Q9H9J2 332 aaKnown RBP19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 TMEM63CQ9P1W3 806 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 DDX41Q9UJV9 622 aaKnown RBP19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 STK24Q9Y6E0 443 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 LGSNQ5TDP6 509 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 ARHGAP24Q8N264 748 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 NUF2Q9BZD4 464 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 SERTAD1Q9UHV2 236 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 I3L4J1 428 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 VPS54Q9P1Q0 977 aa19.66■□□□□ 0.74
LPCAT1-202ENST00000475622 USP19O94966 1318 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 AFAP1L2Q8N4X5 818 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 CPSF2Q9P2I0 782 aaKnown RBP19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 ARHGAP44Q17R89 818 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 CASC4Q6P4E1 433 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 GABPB2Q8TAK5 448 aaPredicted RBP19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 LPIN2Q92539 896 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 IBTKQ9P2D0 1353 aaPredicted RBP19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 ZNF532Q9HCE3 1301 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 ZAP70P43403 619 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 PLCB1Q9NQ66 1216 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 PICK1Q9NRD5 415 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 BABAM1Q9NWV8 329 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 SAR1BQ9Y6B6 198 aa19.65■□□□□ 0.74
LPCAT1-202ENST00000475622 HOXB7P09629 217 aa19.64■□□□□ 0.74
LPCAT1-202ENST00000475622 DENND2CQ68D51 928 aa19.64■□□□□ 0.74
LPCAT1-202ENST00000475622 USH1GQ495M9 461 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 GGA1Q9UJY5 639 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 PTPRKQ15262 1439 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 E7EWF7 191 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 NOP56O00567 594 aaKnown RBP19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 NUCKS1Q9H1E3 243 aaKnown RBP19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 VPS37BQ9H9H4 285 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 PPP2R5CQ13362 524 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 ANKRD20A3Q5VUR7 823 aa19.64■□□□□ 0.73
LPCAT1-202ENST00000475622 TMOD4Q9NZQ9 345 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 FAM170AA1A519 330 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 CHL1O00533 1208 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 BRD1O95696 1058 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 CEP120Q8N960 986 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 SPATA5Q8NB90 893 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 MGARPQ8TDB4 240 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 CLGNO14967 610 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 TBC1D8O95759 1140 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 LONRF2Q1L5Z9 754 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 LZTS2Q9BRK4 669 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 WDR70Q9NW82 654 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 CPXCR1Q8N123 301 aa19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 FNBP4Q8N3X1 1017 aaPredicted RBP19.63■□□□□ 0.73
LPCAT1-202ENST00000475622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.63■□□□□ 0.732e-16■■□□□ 13.8
LPCAT1-202ENST00000475622 TXNDC9O14530 226 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 KIF3CO14782 793 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 ME3Q16798 604 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 MYSM1Q5VVJ2 828 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 ANKRD42Q8N9B4 389 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 C19orf44Q9H6X5 657 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 TOM1O60784 492 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 PPFIA4O75335 1185 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 CCDC38Q502W7 563 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 BAIAP2L1Q9UHR4 511 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 A1BGP04217 495 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 GUCY2FP51841 1108 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 TRIM6Q9C030 488 aaPredicted RBP19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 RAB17Q9H0T7 212 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 YTHDC2Q9H6S0 1430 aaKnown RBP19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 CFBP00751 764 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 KRT19P08727 400 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 REXO1Q8N1G1 1221 aaKnown RBP19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 DUOX2Q9NRD8 1548 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 IL13P35225 146 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 LRMPQ12912 555 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 GCKRQ14397 625 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 RDH13Q8NBN7 331 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 CCDC51Q96ER9 411 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 RPGRIP1Q96KN7 1286 aa19.62■□□□□ 0.73
LPCAT1-202ENST00000475622 NBPF14Q5TI25 921 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 ADALQ6DHV7 355 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 MAPKAPK5Q8IW41 473 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 CCDC89Q8N998 374 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 U2AF1L4Q8WU68 220 aaKnown RBP19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 LGR6Q9HBX8 967 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 KIAA1468Q9P260 1216 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 AFG3L2Q9Y4W6 797 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 PER1O15534 1290 aaPredicted RBP19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 TFAP4Q01664 338 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 OR8K1Q8NGG5 319 aa19.61■□□□□ 0.73
LPCAT1-202ENST00000475622 AMFRQ9UKV5 643 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms