RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 HPCAL4Q9UM19 191 aa20.08■□□□□ 0.8
CCM2-207ENST00000475551 GOLGA8AA7E2F4 631 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 MMP1P03956 469 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 SAFBQ15424 915 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCM2-207ENST00000475551 CYP26C1Q6V0L0 522 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 TBC1D10CQ8IV04 446 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 ZNF594Q96JF6 807 aaPredicted RBP20.07■□□□□ 0.8
CCM2-207ENST00000475551 NCAPGQ9BPX3 1015 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 CEP126Q9P2H0 1117 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 BTBD18B2RXH4 712 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 SHOX2O60902 331 aaPredicted RBP20.07■□□□□ 0.8
CCM2-207ENST00000475551 FMNL1O95466 1100 aaPredicted RBP20.07■□□□□ 0.8
CCM2-207ENST00000475551 NCAPH2Q6IBW4 605 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 IGDCC4Q8TDY8 1250 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 TAOK2Q9UL54 1235 aa20.07■□□□□ 0.8
CCM2-207ENST00000475551 ZC3H4Q9UPT8 1303 aaKnown RBP20.06■□□□□ 0.8
CCM2-207ENST00000475551 MMS22LQ6ZRQ5 1243 aa20.06■□□□□ 0.8
CCM2-207ENST00000475551 TRAPPC11Q7Z392 1133 aa20.06■□□□□ 0.8
CCM2-207ENST00000475551 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
CCM2-207ENST00000475551 FOXP1Q9H334 677 aaPredicted RBP20.06■□□□□ 0.8
CCM2-207ENST00000475551 SENP2Q9HC62 589 aa20.06■□□□□ 0.8
CCM2-207ENST00000475551 ABHD10Q9NUJ1 306 aa20.06■□□□□ 0.8
CCM2-207ENST00000475551 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
CCM2-207ENST00000475551 ANKRD65E5RJM6 399 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 CD44P16070 742 aaKnown RBP20.05■□□□□ 0.8
CCM2-207ENST00000475551 SWT1Q5T5J6 900 aaKnown RBP20.05■□□□□ 0.8
CCM2-207ENST00000475551 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
CCM2-207ENST00000475551 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 SLC26A6Q9BXS9 759 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 CDHR2Q9BYE9 1310 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 TARSL2A2RTX5 802 aaKnown RBP20.05■□□□□ 0.8
CCM2-207ENST00000475551 HSP90AB3PQ58FF7 597 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 TOM1L2Q6ZVM7 507 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 DIS3L2Q8IYB7 885 aaKnown RBP20.05■□□□□ 0.8
CCM2-207ENST00000475551 TTC5Q8N0Z6 440 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 COG1Q8WTW3 980 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 XAGE2Q96GT9 111 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 DRC1Q96MC2 740 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 PLEKHA4Q9H4M7 779 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 CEP131Q9UPN4 1083 aa20.05■□□□□ 0.8
CCM2-207ENST00000475551 ZAP70P43403 619 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 MYCBPQ99417 103 aaPredicted RBP20.04■□□□□ 0.8
CCM2-207ENST00000475551 PUS3Q9BZE2 481 aaKnown RBP20.04■□□□□ 0.8
CCM2-207ENST00000475551 LY9Q9HBG7 655 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 ADORA1P30542 326 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 STX17P56962 302 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 AKAP17AQ02040 695 aaKnown RBP20.04■□□□□ 0.8
CCM2-207ENST00000475551 TRIM14Q14142 442 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 KLHL10Q6JEL2 608 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 SH3RF1Q7Z6J0 888 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
CCM2-207ENST00000475551 TBC1D2BQ9UPU7 963 aa20.04■□□□□ 0.8
CCM2-207ENST00000475551 UBE2Q2LH0YL09 131 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 PSMD14O00487 310 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 PHKG2P15735 406 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 IFNAR1P17181 557 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 STIM1Q13586 685 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 SCARF1Q14162 830 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 RPGRIP1Q96KN7 1286 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 PCDHB6Q9Y5E3 794 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 LRRC10BA6NIK2 292 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 LIFRP42702 1097 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 CSRNP2Q9H175 543 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 LIMA1Q9UHB6 759 aaKnown RBP20.03■□□□□ 0.8
CCM2-207ENST00000475551 SLIT2O94813 1529 aa20.03■□□□□ 0.8
CCM2-207ENST00000475551 B4E1Z4 1266 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 PPP1R3GB7ZBB8 358 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 NBPF14Q5TI25 921 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 MCTP2Q6DN12 878 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 GSDMAQ96QA5 445 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 CEP89Q96ST8 783 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.02■□□□□ 0.8
CCM2-207ENST00000475551 FBXO3Q9UK99 471 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 NID2Q14112 1375 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 USP49Q70CQ1 688 aa20.02■□□□□ 0.8
CCM2-207ENST00000475551 AATFQ9NY61 560 aaKnown RBP eCLIP20.02■□□□□ 0.8
CCM2-207ENST00000475551 TMEM67Q5HYA8 995 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 MICALL1Q8N3F8 863 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 SLF1Q9BQI6 1058 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 NRAPQ86VF7 1730 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 PAGE5Q96GU1 130 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 MYL10Q9BUA6 226 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 SLC12A7Q9Y666 1083 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 TJP1Q07157 1748 aa20.01■□□□□ 0.79
CCM2-207ENST00000475551 ATRNO75882 1429 aa20■□□□□ 0.79
CCM2-207ENST00000475551 EXOC5O00471 708 aa20■□□□□ 0.79
CCM2-207ENST00000475551 GUCY1A2P33402 732 aa20■□□□□ 0.79
CCM2-207ENST00000475551 ADD2P35612 726 aa20■□□□□ 0.79
CCM2-207ENST00000475551 PAPD7Q5XG87 772 aaKnown RBP20■□□□□ 0.79
CCM2-207ENST00000475551 RAPGEF4Q8WZA2 1011 aa20■□□□□ 0.79
CCM2-207ENST00000475551 NUP88Q99567 741 aaPredicted RBP20■□□□□ 0.79
CCM2-207ENST00000475551 KCNJ14Q9UNX9 436 aa20■□□□□ 0.79
CCM2-207ENST00000475551 MYO5AQ9Y4I1 1855 aaKnown RBP20■□□□□ 0.79
CCM2-207ENST00000475551 GGCXP38435 758 aa20■□□□□ 0.79
CCM2-207ENST00000475551 DPYDQ12882 1025 aa20■□□□□ 0.79
CCM2-207ENST00000475551 KRT31Q15323 416 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms