RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 PRKAG2Q9UGJ0 569 aa22.07■■□□□ 1.12
RNF220-212ENST00000475378 GLRX3O76003 335 aaKnown RBP22.06■■□□□ 1.12
RNF220-212ENST00000475378 GRB14Q14449 540 aa22.06■■□□□ 1.12
RNF220-212ENST00000475378 GORABQ5T7V8 394 aa22.06■■□□□ 1.12
RNF220-212ENST00000475378 NAA16Q6N069 864 aaPredicted RBP22.06■■□□□ 1.12
RNF220-212ENST00000475378 CWC22Q9HCG8 908 aaKnown RBP22.06■■□□□ 1.12
RNF220-212ENST00000475378 USP17L15C9J2P7 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L13C9JLJ4 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L11C9JVI0 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L18D6R9N7 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L22D6RA61 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L17D6RBQ6 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L19D6RCP7 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L20D6RJB6 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 UQCRFS1P1P0C7P4 283 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 CNGA1P29973 690 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 CYP2C19P33261 490 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 USP17L24Q0WX57 530 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 LBX2Q6XYB7 198 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 CATSPERGQ6ZRH7 1159 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 MYLIPQ8WY64 445 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 TRIM34Q9BYJ4 488 aa22.05■■□□□ 1.12
RNF220-212ENST00000475378 API5Q9BZZ5 524 aaKnown RBP22.05■■□□□ 1.12
RNF220-212ENST00000475378 GH2P01242 217 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 CYBAP13498 195 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 SMAD3P84022 425 aaKnown RBP22.04■■□□□ 1.12
RNF220-212ENST00000475378 ATP2B2Q01814 1243 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 SLC39A5Q6ZMH5 540 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 BTBD7Q9P203 1132 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 ATP11BQ9Y2G3 1177 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 SMCHD1A6NHR9 2005 aa22.04■■□□□ 1.12
RNF220-212ENST00000475378 SNX17Q15036 470 aa22.03■■□□□ 1.12
RNF220-212ENST00000475378 GJC2Q5T442 439 aaPredicted RBP22.03■■□□□ 1.12
RNF220-212ENST00000475378 WDR78Q5VTH9 848 aa22.03■■□□□ 1.12
RNF220-212ENST00000475378 SAP30BPQ9UHR5 308 aaKnown RBP22.03■■□□□ 1.12
RNF220-212ENST00000475378 ZNFX1Q9P2E3 1918 aaKnown RBP22.02■■□□□ 1.12
RNF220-212ENST00000475378 HLA-DOAP06340 250 aa22.02■■□□□ 1.12
RNF220-212ENST00000475378 ZYXQ15942 572 aaKnown RBP22.02■■□□□ 1.12
RNF220-212ENST00000475378 TATDN1Q6P1N9 297 aa22.02■■□□□ 1.12
RNF220-212ENST00000475378 BADQ92934 168 aa22.02■■□□□ 1.12
RNF220-212ENST00000475378 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
RNF220-212ENST00000475378 SNRKQ9NRH2 765 aa22.02■■□□□ 1.12
RNF220-212ENST00000475378 A0A0G2JMZ2 1700 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 GNAI3P08754 354 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 VCAM1P19320 739 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 TRMT2AQ8IZ69 625 aaKnown RBP22.01■■□□□ 1.11
RNF220-212ENST00000475378 ARRDC4Q8NCT1 418 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 FEZ1Q99689 392 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 KIAA1683Q9H0B3 1180 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 PDLIM7Q9NR12 457 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 IVNS1ABPQ9Y6Y0 642 aa22.01■■□□□ 1.11
RNF220-212ENST00000475378 SPDYE16A6NNV3 312 aaPredicted RBP22■■□□□ 1.11
RNF220-212ENST00000475378 CYP2E1P05181 493 aaPredicted RBP22■■□□□ 1.11
RNF220-212ENST00000475378 USP14P54578 494 aa22■■□□□ 1.11
RNF220-212ENST00000475378 TRIM60Q495X7 471 aa22■■□□□ 1.11
RNF220-212ENST00000475378 ATF7IPQ6VMQ6 1270 aa22■■□□□ 1.11
RNF220-212ENST00000475378 TRIM43BA6NCK2 446 aa21.99■■□□□ 1.11
RNF220-212ENST00000475378 DYNLL1P63167 89 aaKnown RBP21.99■■□□□ 1.11
RNF220-212ENST00000475378 OLFML2BQ68BL8 750 aa21.99■■□□□ 1.11
RNF220-212ENST00000475378 SH3RF1Q7Z6J0 888 aa21.99■■□□□ 1.11
RNF220-212ENST00000475378 ACER1Q8TDN7 264 aa21.99■■□□□ 1.11
RNF220-212ENST00000475378 TRIM43Q96BQ3 446 aaPredicted RBP21.99■■□□□ 1.11
RNF220-212ENST00000475378 PRDM5Q9NQX1 630 aaPredicted RBP21.99■■□□□ 1.11
RNF220-212ENST00000475378 KBTBD13C9JR72 458 aa21.98■■□□□ 1.11
RNF220-212ENST00000475378 IGSF3O75054 1194 aa21.98■■□□□ 1.11
RNF220-212ENST00000475378 CT47B1P0C2W7 299 aaPredicted RBP21.98■■□□□ 1.11
RNF220-212ENST00000475378 FOSL2P15408 326 aa21.98■■□□□ 1.11
RNF220-212ENST00000475378 C1orf53Q5VUE5 145 aa21.98■■□□□ 1.11
RNF220-212ENST00000475378 ANO1Q5XXA6 986 aa21.98■■□□□ 1.11
RNF220-212ENST00000475378 SYMPKQ92797 1274 aaKnown RBP21.98■■□□□ 1.11
RNF220-212ENST00000475378 PNMA6EA0A0J9YXQ4 647 aa21.97■■□□□ 1.11
RNF220-212ENST00000475378 SEPT4O43236 478 aa21.97■■□□□ 1.11
RNF220-212ENST00000475378 EHD4Q9H223 541 aa21.97■■□□□ 1.11
RNF220-212ENST00000475378 PARP14Q460N5 1801 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 TMEM265A0A087WTH1 108 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 ADORA2AP29274 412 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 G3BP1Q13283 466 aaKnown RBP eCLIP21.96■■□□□ 1.11
RNF220-212ENST00000475378 RAB3GAP1Q15042 981 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 DBNDD2Q9BQY9 259 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 RPAP3Q9H6T3 665 aaPredicted RBP21.96■■□□□ 1.11
RNF220-212ENST00000475378 PIH1D3Q9NQM4 214 aaKnown RBP21.96■■□□□ 1.11
RNF220-212ENST00000475378 SERPINB13Q9UIV8 391 aa21.96■■□□□ 1.11
RNF220-212ENST00000475378 COBLO75128 1261 aa21.95■■□□□ 1.1
RNF220-212ENST00000475378 ITGB8P26012 769 aa21.95■■□□□ 1.1
RNF220-212ENST00000475378 LRRC41Q15345 812 aa21.95■■□□□ 1.1
RNF220-212ENST00000475378 DPP9Q86TI2 863 aa21.95■■□□□ 1.1
RNF220-212ENST00000475378 MOV10L1Q9BXT6 1211 aaKnown RBP21.95■■□□□ 1.1
RNF220-212ENST00000475378 GPR108Q9NPR9 543 aa21.95■■□□□ 1.1
RNF220-212ENST00000475378 MYO9BQ13459 2157 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 STRNO43815 780 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 GUCY1A2P33402 732 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 ADCYAP1R1P41586 468 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 ZAP70P43403 619 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 ABCB5Q2M3G0 1257 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 CERKLQ49MI3 558 aaPredicted RBP21.94■■□□□ 1.1
RNF220-212ENST00000475378 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 ZNF512BQ96KM6 892 aaPredicted RBP21.94■■□□□ 1.1
RNF220-212ENST00000475378 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms