RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 IL13P35225 146 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 NLRP12P59046 1061 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 TMCO4Q5TGY1 634 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 GIPC1O14908 333 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 GKAP1Q5VSY0 366 aaPredicted RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 RNF169Q8NCN4 708 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 SLF1Q9BQI6 1058 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 MKRN1Q9UHC7 482 aaKnown RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 NFE2L3Q9Y4A8 694 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 TBC1D8O95759 1140 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 TRIM14Q14142 442 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 SDCCAG8Q86SQ7 713 aaPredicted RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 TESK2Q96S53 571 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 SGSM2O43147 1006 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 NOL3O60936 208 aaKnown RBP12.17□□□□□ -0.46
VAPB-204ENST00000475243 MAN1A1P33908 653 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 DNM2P50570 870 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 CYP2J2P51589 502 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 GCKRQ14397 625 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 AFAP1L1Q8TED9 768 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 ST7Q9NRC1 585 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
VAPB-204ENST00000475243 TECP42680 631 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
VAPB-204ENST00000475243 DLGAP5Q15398 846 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.16□□□□□ -0.46
VAPB-204ENST00000475243 MAST3O60307 1309 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 BCRP11274 1271 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 KLHL30Q0D2K2 578 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 FAM47CQ5HY64 1035 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 KRT40Q6A162 431 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 IBTKQ9P2D0 1353 aaPredicted RBP12.16□□□□□ -0.46
VAPB-204ENST00000475243 CIB2O75838 187 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 IFT20Q8IY31 132 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 GLG1Q92896 1179 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 SCNN1DP51172 638 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 ADKP55263 362 aaKnown RBP12.16□□□□□ -0.46
VAPB-204ENST00000475243 FAM102BQ5T8I3 360 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 CCDC105Q8IYK2 499 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 NUP58Q9BVL2 599 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
VAPB-204ENST00000475243 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 MROH5Q6ZUA9 1318 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 REXO1Q8N1G1 1221 aaKnown RBP12.16□□□□□ -0.46
VAPB-204ENST00000475243 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
VAPB-204ENST00000475243 GDAP1L1Q96MZ0 367 aa12.16□□□□□ -0.46
VAPB-204ENST00000475243 RIOK3O14730 519 aaKnown RBP12.15□□□□□ -0.46
VAPB-204ENST00000475243 DKC1O60832 514 aaKnown RBP eCLIP12.15□□□□□ -0.46
VAPB-204ENST00000475243 MAGEA1P43355 309 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 MFSD14BQ5SR56 506 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 MAPKBP1O60336 1514 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 KRT25Q7Z3Z0 450 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 CCDC89Q8N998 374 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 M0QZ92 97 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 GAS7O60861 476 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 ABCB4P21439 1286 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 ZNF75DP51815 510 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 FYB2Q5VWT5 728 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
VAPB-204ENST00000475243 USP21Q9UK80 565 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 USP17L21D6R901 530 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 BIRC2Q13490 618 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 EP400NLQ6ZTU2 488 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
VAPB-204ENST00000475243 MLKLQ8NB16 471 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 ATP11AP98196 1134 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
VAPB-204ENST00000475243 PEX26Q7Z412 305 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
VAPB-204ENST00000475243 TCP10L2B9ZVM9 353 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 GYG1P46976 350 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 NLRX1Q86UT6 975 aa12.15□□□□□ -0.46
VAPB-204ENST00000475243 ZNF496Q96IT1 587 aaPredicted RBP12.15□□□□□ -0.46
VAPB-204ENST00000475243 GOLGA6CA6NDK9 693 aa12.15□□□□□ -0.47
VAPB-204ENST00000475243 GOLGA6DP0CG33 693 aa12.15□□□□□ -0.47
VAPB-204ENST00000475243 ELF2Q15723 593 aa12.15□□□□□ -0.47
VAPB-204ENST00000475243 SFMBT2Q5VUG0 894 aa12.15□□□□□ -0.47
VAPB-204ENST00000475243 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.47
VAPB-204ENST00000475243 GOLGA6AQ9NYA3 693 aa12.15□□□□□ -0.47
VAPB-204ENST00000475243 CTSWP56202 376 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 NUP160Q12769 1436 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 GLT8D2Q9H1C3 349 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 TACC3Q9Y6A5 838 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 H7C1D1 291 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 NDUFAB1O14561 156 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms