RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 AKAP17AQ02040 695 aaKnown RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 NIM1KQ8IY84 436 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 GZF1Q9H116 711 aaPredicted RBP11.87□□□□□ -0.51
PCCB-213ENST00000475214 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 TCHHQ07283 1943 aa11.87□□□□□ -0.51
PCCB-213ENST00000475214 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
PCCB-213ENST00000475214 PSME4Q14997 1843 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 FIBPO43427 364 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 EPHX2P34913 555 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
PCCB-213ENST00000475214 RSBN1LQ6PCB5 846 aaPredicted RBP11.86□□□□□ -0.51
PCCB-213ENST00000475214 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
PCCB-213ENST00000475214 PHKBQ93100 1093 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
PCCB-213ENST00000475214 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
PCCB-213ENST00000475214 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 ZNRF3Q9ULT6 936 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
PCCB-213ENST00000475214 ADAMTSL1Q8N6G6 1762 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 NMT2O60551 498 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
PCCB-213ENST00000475214 DEXIO95424 95 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
PCCB-213ENST00000475214 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 POTEJP0CG39 1038 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 KIF5BP33176 963 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 UBE2HP62256 183 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 TROAPQ12815 778 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 BRAPQ7Z569 592 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
PCCB-213ENST00000475214 SLC44A5Q8NCS7 719 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 NEDD1Q8NHV4 660 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
PCCB-213ENST00000475214 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 IDI2Q9BXS1 227 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 RNF26Q9BY78 433 aaPredicted RBP11.85□□□□□ -0.51
PCCB-213ENST00000475214 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
PCCB-213ENST00000475214 GJA3Q9Y6H8 435 aa11.85□□□□□ -0.51
PCCB-213ENST00000475214 PSMD14O00487 310 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 RAD17O75943 681 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 XBP1P17861 261 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
PCCB-213ENST00000475214 CFAP100Q494V2 611 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 KRT40Q6A162 431 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 OGFOD1Q8N543 542 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 GPT2Q8TD30 523 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
PCCB-213ENST00000475214 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 ELP1O95163 1332 aa11.84□□□□□ -0.51
PCCB-213ENST00000475214 GOLGA6L4A6NEF3 574 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
PCCB-213ENST00000475214 GADD45BO75293 160 aaPredicted RBP11.83□□□□□ -0.52
PCCB-213ENST00000475214 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
PCCB-213ENST00000475214 GNAQP50148 359 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 GABPAQ06546 454 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 TNIP1Q15025 636 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 SAFBQ15424 915 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCCB-213ENST00000475214 PPP4R3BQ5MIZ7 849 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 CAVIN1Q6NZI2 390 aaKnown RBP11.83□□□□□ -0.52
PCCB-213ENST00000475214 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 PNMA1Q8ND90 353 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 AGBL3Q8NEM8 1001 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 EHD4Q9H223 541 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 STX8Q9UNK0 236 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 MYH15Q9Y2K3 1946 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
PCCB-213ENST00000475214 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
PCCB-213ENST00000475214 TMEM88BA6NKF7 163 aa11.82□□□□□ -0.52
PCCB-213ENST00000475214 ENTPD3O75355 529 aa11.82□□□□□ -0.52
PCCB-213ENST00000475214 TOP1P11387 765 aaKnown RBP11.82□□□□□ -0.52
PCCB-213ENST00000475214 KIF23Q02241 960 aaPredicted RBP11.82□□□□□ -0.52
PCCB-213ENST00000475214 NFIAQ12857 509 aa11.82□□□□□ -0.52
PCCB-213ENST00000475214 DLGAP5Q15398 846 aa11.82□□□□□ -0.52
PCCB-213ENST00000475214 CIAPIN1Q6FI81 312 aa11.82□□□□□ -0.52
PCCB-213ENST00000475214 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
PCCB-213ENST00000475214 FOXP4Q8IVH2 680 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms