RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
CDH23-211ENST00000475158 PAK1Q13153 545 aa10.8□□□□□ -0.68
CDH23-211ENST00000475158 DPP8Q6V1X1 898 aaPredicted RBP10.8□□□□□ -0.68
CDH23-211ENST00000475158 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
CDH23-211ENST00000475158 KIF2CQ99661 725 aa10.8□□□□□ -0.68
CDH23-211ENST00000475158 TTF2Q9UNY4 1162 aaKnown RBP10.8□□□□□ -0.68
CDH23-211ENST00000475158 HS2ST1Q7LGA3 356 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 CNPY4Q8N129 248 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 MLKLQ8NB16 471 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 ZSWIM5Q9P217 1185 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 TLDC2A0PJX2 215 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 CFBP00751 764 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 PTGDRQ13258 359 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 NONOQ15233 471 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH23-211ENST00000475158 ERCC6LQ2NKX8 1250 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 EYA3Q99504 573 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 LRRC27Q9C0I9 530 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 EHMT1Q9H9B1 1298 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 ZDHHC9Q9Y397 364 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 MAP3K4Q9Y6R4 1608 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 WDR17Q8IZU2 1322 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 WDHD1O75717 1129 aaPredicted RBP10.79□□□□□ -0.68
CDH23-211ENST00000475158 CETN2P41208 172 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 KRT83P78385 493 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 UBE4AQ14139 1066 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 RDH13Q8NBN7 331 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 ZSCAN10Q96SZ4 725 aaPredicted RBP10.79□□□□□ -0.68
CDH23-211ENST00000475158 CARD10Q9BWT7 1032 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 TMEM51Q9NW97 253 aa10.79□□□□□ -0.68
CDH23-211ENST00000475158 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
CDH23-211ENST00000475158 BICDL2A1A5D9 508 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 SMCO2A6NFE2 343 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 KRT13P13646 458 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 TECP42680 631 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 SF3A3Q12874 501 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDH23-211ENST00000475158 GRM1Q13255 1194 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 IL25Q9H293 177 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 PIH1D3Q9NQM4 214 aaKnown RBP10.78□□□□□ -0.68
CDH23-211ENST00000475158 ZEB2O60315 1214 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 ARID5BQ14865 1188 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 NAA25Q14CX7 972 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 TERF2Q15554 542 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 KIAA0753Q2KHM9 967 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 CACTINQ8WUQ7 758 aaKnown RBP10.78□□□□□ -0.68
CDH23-211ENST00000475158 NELFBQ8WX92 580 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDH23-211ENST00000475158 HDAC9Q9UKV0 1011 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 GJA3Q9Y6H8 435 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 CARMIL3Q8ND23 1372 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 KLRF2D3W0D1 207 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 EBAG9O00559 213 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 BACH1O14867 736 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 RASGRF1Q13972 1273 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.78□□□□□ -0.68
CDH23-211ENST00000475158 REXO1Q8N1G1 1221 aaKnown RBP10.78□□□□□ -0.68
CDH23-211ENST00000475158 TTLL11Q8NHH1 800 aa10.78□□□□□ -0.68
CDH23-211ENST00000475158 RBM17Q96I25 401 aaKnown RBP10.78□□□□□ -0.68
CDH23-211ENST00000475158 MCAMP43121 646 aa10.77□□□□□ -0.68
CDH23-211ENST00000475158 ATRIPQ8WXE1 791 aa10.77□□□□□ -0.68
CDH23-211ENST00000475158 JRKLQ9Y4A0 524 aa10.77□□□□□ -0.68
CDH23-211ENST00000475158 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.68
CDH23-211ENST00000475158 NEBLO76041 1014 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 PLCD1P51178 756 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 ERFEQ4G0M1 354 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 PPM1EQ8WY54 764 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 PGBD1Q96JS3 809 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 ZMYM6O95789 1325 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 MCM3P25205 808 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.69
CDH23-211ENST00000475158 ANKRD13CQ8N6S4 541 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 HECW2Q9P2P5 1572 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 CMA1P23946 247 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 OAS2P29728 719 aaKnown RBP10.77□□□□□ -0.69
CDH23-211ENST00000475158 SCARF1Q14162 830 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 PPP2R5AQ15172 486 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 UBE3CQ15386 1083 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 LRCH2Q5VUJ6 765 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 SUSD4Q5VX71 490 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 SPECC1LQ69YQ0 1117 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 CABP7Q86V35 215 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 JDP2Q8WYK2 163 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 CPVLQ9H3G5 476 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 USP40Q9NVE5 1235 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.69
CDH23-211ENST00000475158 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
CDH23-211ENST00000475158 POTEB2H3BUK9 544 aa10.76□□□□□ -0.69
CDH23-211ENST00000475158 ADD2P35612 726 aa10.76□□□□□ -0.69
CDH23-211ENST00000475158 TOB2Q14106 344 aaPredicted RBP10.76□□□□□ -0.69
CDH23-211ENST00000475158 CCDC25Q86WR0 208 aa10.76□□□□□ -0.69
CDH23-211ENST00000475158 TRIM31Q9BZY9 425 aa10.76□□□□□ -0.69
CDH23-211ENST00000475158 CPSF2Q9P2I0 782 aaKnown RBP10.76□□□□□ -0.69
CDH23-211ENST00000475158 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
CDH23-211ENST00000475158 ARHGAP6O43182 974 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms