RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 ATP1A3P13637 1013 aa14.28□□□□□ -0.12
RNF220-211ENST00000474956 CASP1P29466 404 aa14.28□□□□□ -0.12
RNF220-211ENST00000474956 TROAPQ12815 778 aa14.28□□□□□ -0.12
RNF220-211ENST00000474956 ZNF827Q17R98 1081 aa14.28□□□□□ -0.12
RNF220-211ENST00000474956 KRT222Q8N1A0 295 aa14.28□□□□□ -0.12
RNF220-211ENST00000474956 SLU7O95391 586 aaKnown RBP14.27□□□□□ -0.12
RNF220-211ENST00000474956 PRR29P0C7W0 189 aa14.27□□□□□ -0.12
RNF220-211ENST00000474956 GPSM2P81274 684 aa14.27□□□□□ -0.12
RNF220-211ENST00000474956 DZIP1Q86YF9 867 aaKnown RBP14.27□□□□□ -0.12
RNF220-211ENST00000474956 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.12
RNF220-211ENST00000474956 HPSEQ9Y251 543 aa14.27□□□□□ -0.12
RNF220-211ENST00000474956 ZNF831Q5JPB2 1677 aa14.27□□□□□ -0.13
RNF220-211ENST00000474956 BMP6P22004 513 aa14.27□□□□□ -0.13
RNF220-211ENST00000474956 KMT5BQ4FZB7 885 aa14.27□□□□□ -0.13
RNF220-211ENST00000474956 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.13
RNF220-211ENST00000474956 BRIP1Q9BX63 1249 aa14.27□□□□□ -0.13
RNF220-211ENST00000474956 STK36Q9NRP7 1315 aa14.27□□□□□ -0.13
RNF220-211ENST00000474956 LMOD1P29536 600 aaPredicted RBP14.26□□□□□ -0.13
RNF220-211ENST00000474956 DHX8Q14562 1220 aaKnown RBP14.26□□□□□ -0.13
RNF220-211ENST00000474956 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 USP17L3A6NCW0 530 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 USP17L4A6NCW7 530 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 DEXIO95424 95 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
RNF220-211ENST00000474956 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 USP17L1Q7RTZ2 530 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
RNF220-211ENST00000474956 TRIM37O94972 964 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 PDE4BQ07343 736 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 BPIFA3Q9BQP9 254 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 HSD3B7Q9H2F3 369 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 SRCAPQ6ZRS2 3230 aa14.26□□□□□ -0.13
RNF220-211ENST00000474956 GYS1P13807 737 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 PLCD1P51178 756 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 NCAPHQ15003 741 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 CCDC150Q8NCX0 1101 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 FBXO2Q9UK22 296 aaPredicted RBP14.25□□□□□ -0.13
RNF220-211ENST00000474956 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 LY75O60449 1722 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 A0A087X0B3 334 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 SLFN14P0C7P3 912 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 MAPKAPK5Q8IW41 473 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 ANKRD2Q9GZV1 360 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 GOLGA8FQ08AF8 430 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 GOLGA8DPQ0D2H9 430 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 GRAPQ13588 217 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 NPY5RQ15761 445 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 STAG2Q8N3U4 1231 aa14.25□□□□□ -0.13
RNF220-211ENST00000474956 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
RNF220-211ENST00000474956 CRNKL1Q9BZJ0 848 aaKnown RBP14.25□□□□□ -0.13
RNF220-211ENST00000474956 NID2Q14112 1375 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 POLR2DO15514 142 aaKnown RBP14.24□□□□□ -0.13
RNF220-211ENST00000474956 NRDCO43847 1150 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 PPP6R2O75170 966 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 TUBB4AP04350 444 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 SLURP2P0DP57 97 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 KCNJ6P48051 423 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 ELF2Q15723 593 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 FBXO38Q6PIJ6 1188 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 DPF2Q92785 391 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 EPSTI1Q96J88 318 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 XPO4Q9C0E2 1151 aaKnown RBP14.24□□□□□ -0.13
RNF220-211ENST00000474956 FAM53CQ9NYF3 392 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 IFNKQ9P0W0 207 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.24□□□□□ -0.13
RNF220-211ENST00000474956 PCDHA5Q9Y5H7 936 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 V9GYY5 206 aaPredicted RBP14.24□□□□□ -0.13
RNF220-211ENST00000474956 PSDA5PKW4 1024 aaPredicted RBP14.24□□□□□ -0.13
RNF220-211ENST00000474956 TSPY2A6NKD2 308 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 DDR1Q08345 913 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 IQCA1Q86XH1 822 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 GPKOWQ92917 476 aaPredicted RBP eCLIP14.24□□□□□ -0.13
RNF220-211ENST00000474956 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 KIAA1551Q9HCM1 1747 aa14.24□□□□□ -0.13
RNF220-211ENST00000474956 UFL1O94874 794 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 TPM4P67936 248 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 ZNF174Q15697 407 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 SLC35G1Q2M3R5 365 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
RNF220-211ENST00000474956 RASGRP4Q8TDF6 673 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 L2HGDHQ9H9P8 463 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 SERTAD1Q9UHV2 236 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 SMC2O95347 1197 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 LDHBP07195 334 aaKnown RBP14.23□□□□□ -0.13
RNF220-211ENST00000474956 USP5P45974 858 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 TFAP4Q01664 338 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 SAFBQ15424 915 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNF220-211ENST00000474956 TERF2Q15554 542 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 E4F1Q66K89 784 aaPredicted RBP14.23□□□□□ -0.13
RNF220-211ENST00000474956 STAMQ92783 540 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 MXD3Q9BW11 206 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 CNTNAP5Q8WYK1 1306 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 COBLO75128 1261 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 FGRP09769 529 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms