RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 SLC15A5A6NIM6 579 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L15C9J2P7 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L13C9JLJ4 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L11C9JVI0 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L18D6R9N7 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L22D6RA61 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L17D6RBQ6 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L19D6RCP7 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L20D6RJB6 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 MSCO60682 206 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 PPP4CP60510 307 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 CCNA1P78396 465 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 USP17L24Q0WX57 530 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 SLC39A5Q6ZMH5 540 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 ADGRA1Q86SQ6 560 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 BADQ92934 168 aa15.26■□□□□ 0.03
TRIM13-207ENST00000474805 TTYH1Q9H313 450 aaPredicted RBP15.26■□□□□ 0.03
TRIM13-207ENST00000474805 PRDM5Q9NQX1 630 aaPredicted RBP15.26■□□□□ 0.03
TRIM13-207ENST00000474805 GH2P01242 217 aa15.25■□□□□ 0.03
TRIM13-207ENST00000474805 PLCG2P16885 1265 aa15.25■□□□□ 0.03
TRIM13-207ENST00000474805 CATSPERGQ6ZRH7 1159 aa15.25■□□□□ 0.03
TRIM13-207ENST00000474805 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
TRIM13-207ENST00000474805 BTBD7Q9P203 1132 aa15.25■□□□□ 0.03
TRIM13-207ENST00000474805 PRUNE2Q8WUY3 3088 aa15.25■□□□□ 0.03
TRIM13-207ENST00000474805 HOXC6P09630 235 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 GRB14Q14449 540 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 ANO1Q5XXA6 986 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 C12orf42Q96LP6 360 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 FEZ1Q99689 392 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
TRIM13-207ENST00000474805 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
TRIM13-207ENST00000474805 SMCHD1A6NHR9 2005 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-207ENST00000474805 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 CYBAP13498 195 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 FOSL2P15408 326 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 DYNLL1P63167 89 aaKnown RBP15.23■□□□□ 0.03
TRIM13-207ENST00000474805 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
TRIM13-207ENST00000474805 MTX1Q13505 466 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 TRIM60Q495X7 471 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 ARRDC4Q8NCT1 418 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 TTC28Q96AY4 2481 aa15.23■□□□□ 0.03
TRIM13-207ENST00000474805 ZNFX1Q9P2E3 1918 aaKnown RBP15.23■□□□□ 0.03
TRIM13-207ENST00000474805 KBTBD13C9JR72 458 aa15.22■□□□□ 0.03
TRIM13-207ENST00000474805 IGHA2P01877 340 aa15.22■□□□□ 0.03
TRIM13-207ENST00000474805 GNAI3P08754 354 aa15.22■□□□□ 0.03
TRIM13-207ENST00000474805 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRIM13-207ENST00000474805 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
TRIM13-207ENST00000474805 DPP9Q86TI2 863 aa15.22■□□□□ 0.03
TRIM13-207ENST00000474805 ACER1Q8TDN7 264 aa15.22■□□□□ 0.03
TRIM13-207ENST00000474805 CDH23Q9H251 3354 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 TRIM43BA6NCK2 446 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 CYP2E1P05181 493 aaPredicted RBP15.21■□□□□ 0.03
TRIM13-207ENST00000474805 VCAM1P19320 739 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 TATDN1Q6P1N9 297 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 ATF7IPQ6VMQ6 1270 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 SYMPKQ92797 1274 aaKnown RBP15.21■□□□□ 0.03
TRIM13-207ENST00000474805 FERMT2Q96AC1 680 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 TRIM43Q96BQ3 446 aaPredicted RBP15.21■□□□□ 0.03
TRIM13-207ENST00000474805 PDLIM7Q9NR12 457 aa15.21■□□□□ 0.03
TRIM13-207ENST00000474805 SPDYE16A6NNV3 312 aaPredicted RBP15.2■□□□□ 0.02
TRIM13-207ENST00000474805 ADCYAP1R1P41586 468 aa15.2■□□□□ 0.02
TRIM13-207ENST00000474805 USP14P54578 494 aa15.2■□□□□ 0.02
TRIM13-207ENST00000474805 SNX17Q15036 470 aa15.2■□□□□ 0.02
TRIM13-207ENST00000474805 PRAMEF19Q5SWL8 479 aa15.2■□□□□ 0.02
TRIM13-207ENST00000474805 LBX2Q6XYB7 198 aa15.2■□□□□ 0.02
TRIM13-207ENST00000474805 KIAA1683Q9H0B3 1180 aa15.2■□□□□ 0.02
TRIM13-207ENST00000474805 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
TRIM13-207ENST00000474805 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
TRIM13-207ENST00000474805 ADORA2AP29274 412 aa15.19■□□□□ 0.02
TRIM13-207ENST00000474805 ABCB5Q2M3G0 1257 aa15.19■□□□□ 0.02
TRIM13-207ENST00000474805 CERKLQ49MI3 558 aaPredicted RBP15.19■□□□□ 0.02
TRIM13-207ENST00000474805 CCDC158Q5M9N0 1113 aa15.19■□□□□ 0.02
TRIM13-207ENST00000474805 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
TRIM13-207ENST00000474805 PIH1D3Q9NQM4 214 aaKnown RBP15.19■□□□□ 0.02
TRIM13-207ENST00000474805 ZNF236Q9UL36 1845 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 SEPT4O43236 478 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 COBLO75128 1261 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 CYP7A1P22680 504 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 ITGB8P26012 769 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 ZAP70P43403 619 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 USP5P45974 858 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 EPHB4P54760 987 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 TLE2Q04725 743 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 OLFML2BQ68BL8 750 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
TRIM13-207ENST00000474805 MIGA1Q8NAN2 632 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 MOV10L1Q9BXT6 1211 aaKnown RBP15.18■□□□□ 0.02
TRIM13-207ENST00000474805 SERPINB13Q9UIV8 391 aa15.18■□□□□ 0.02
TRIM13-207ENST00000474805 COL9A1P20849 921 aa15.17■□□□□ 0.02
TRIM13-207ENST00000474805 GRIN2CQ14957 1233 aa15.17■□□□□ 0.02
TRIM13-207ENST00000474805 LRRC41Q15345 812 aa15.17■□□□□ 0.02
TRIM13-207ENST00000474805 TNNI3KQ59H18 835 aa15.17■□□□□ 0.02
TRIM13-207ENST00000474805 USP38Q8NB14 1042 aa15.17■□□□□ 0.02
TRIM13-207ENST00000474805 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
TRIM13-207ENST00000474805 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
TRIM13-207ENST00000474805 FPGT-TNNI3KV9GXZ4 949 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms