RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 UBE2HP62256 183 aa22.97■■□□□ 1.27
SSR1-204ENST00000474597 CAVIN1Q6NZI2 390 aaKnown RBP22.97■■□□□ 1.27
SSR1-204ENST00000474597 AGBL3Q8NEM8 1001 aa22.97■■□□□ 1.27
SSR1-204ENST00000474597 SPATA32Q96LK8 384 aa22.97■■□□□ 1.27
SSR1-204ENST00000474597 TRIM34Q9BYJ4 488 aa22.97■■□□□ 1.27
SSR1-204ENST00000474597 ZBTB12Q9Y330 459 aaPredicted RBP22.97■■□□□ 1.27
SSR1-204ENST00000474597 GADD45BO75293 160 aaPredicted RBP22.96■■□□□ 1.27
SSR1-204ENST00000474597 GNL2Q13823 731 aaKnown RBP22.96■■□□□ 1.27
SSR1-204ENST00000474597 DLGAP5Q15398 846 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 KRT40Q6A162 431 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 CIAPIN1Q6FI81 312 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 PRMT6Q96LA8 375 aaPredicted RBP22.96■■□□□ 1.27
SSR1-204ENST00000474597 GMLQ99445 158 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 EHD4Q9H223 541 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 GJB4Q9NTQ9 266 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 FAM198AQ9UFP1 575 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 NFKBIEO00221 500 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 ATL3Q6DD88 541 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 TMTC3Q6ZXV5 915 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 MAP3K14Q99558 947 aa22.96■■□□□ 1.27
SSR1-204ENST00000474597 PLEKHA8P1O95397 391 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 CXCL9Q07325 125 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 BRAPQ7Z569 592 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 ZFPM1Q8IX07 1006 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 TMEM47Q9BQJ4 181 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 SPON1Q9HCB6 807 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 PI4KBQ9UBF8 816 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 ARFGEF1Q9Y6D6 1849 aa22.95■■□□□ 1.26
SSR1-204ENST00000474597 ELP1O95163 1332 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 ENTPD3O75355 529 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 XBP1P17861 261 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 TNIP1Q15025 636 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 TPRNQ4KMQ1 711 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 PLIN4Q96Q06 1357 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 LTBP3Q9NS15 1303 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 SPDYE2BA6NHP3 402 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 PRPF3O43395 683 aaKnown RBP22.94■■□□□ 1.26
SSR1-204ENST00000474597 SPDYE6P0CI01 402 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 GUCY1A2P33402 732 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 SAFBQ15424 915 aaKnown RBP eCLIP22.94■■□□□ 1.26
SSR1-204ENST00000474597 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 CEP95Q96GE4 821 aa22.94■■□□□ 1.26
SSR1-204ENST00000474597 UBE2Q2LH0YL09 131 aa22.93■■□□□ 1.26
SSR1-204ENST00000474597 GNAQP50148 359 aa22.93■■□□□ 1.26
SSR1-204ENST00000474597 KIF23Q02241 960 aaPredicted RBP22.93■■□□□ 1.26
SSR1-204ENST00000474597 SYAP1Q96A49 352 aaPredicted RBP22.93■■□□□ 1.26
SSR1-204ENST00000474597 GOLGA6L4A6NEF3 574 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 DDTLA6NHG4 134 aaPredicted RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 TOP1P11387 765 aaKnown RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 AKR1B1P15121 316 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 GRM4Q14833 912 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 LEO1Q8WVC0 666 aaPredicted RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 MTMR7Q9Y216 660 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 V9GY48 417 aaPredicted RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 SHMT1P34896 483 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 DEKP35659 375 aaKnown RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 CEBPZQ03701 1054 aaKnown RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 FUT2Q10981 343 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 SRBD1Q8N5C6 995 aaKnown RBP22.92■■□□□ 1.26
SSR1-204ENST00000474597 CCDC17Q96LX7 622 aa22.92■■□□□ 1.26
SSR1-204ENST00000474597 GOLGB1Q14789 3259 aaKnown RBP22.91■■□□□ 1.26
SSR1-204ENST00000474597 CNTNAP5Q8WYK1 1306 aa22.91■■□□□ 1.26
SSR1-204ENST00000474597 MPHOSPH10O00566 681 aaKnown RBP22.91■■□□□ 1.26
SSR1-204ENST00000474597 RASSF7Q02833 373 aa22.91■■□□□ 1.26
SSR1-204ENST00000474597 FOXP4Q8IVH2 680 aaPredicted RBP22.91■■□□□ 1.26
SSR1-204ENST00000474597 SIPA1L1O43166 1804 aa22.91■■□□□ 1.26
SSR1-204ENST00000474597 MYO1BO43795 1136 aa22.9■■□□□ 1.26
SSR1-204ENST00000474597 MTMR4Q9NYA4 1195 aa22.9■■□□□ 1.26
SSR1-204ENST00000474597 RBM27Q9P2N5 1060 aaKnown RBP22.9■■□□□ 1.26
SSR1-204ENST00000474597 ZNF70Q9UC06 446 aaPredicted RBP22.9■■□□□ 1.26
SSR1-204ENST00000474597 CLRN2A0PK11 232 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 KIF28PB7ZC32 967 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 TCP10L2B9ZVM9 353 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 MMP1P03956 469 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 PPP4R3BQ5MIZ7 849 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 MYSM1Q5VVJ2 828 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 USP28Q96RU2 1077 aa22.89■■□□□ 1.26
SSR1-204ENST00000474597 COL2A1P02458 1487 aaPredicted RBP22.89■■□□□ 1.26
SSR1-204ENST00000474597 ATRNL1Q5VV63 1379 aa22.89■■□□□ 1.25
SSR1-204ENST00000474597 EIF6P56537 245 aaKnown RBP22.89■■□□□ 1.25
SSR1-204ENST00000474597 SH3BP5LQ7L8J4 393 aa22.89■■□□□ 1.25
SSR1-204ENST00000474597 MTMR14Q8NCE2 650 aa22.89■■□□□ 1.25
SSR1-204ENST00000474597 MAD2L2Q9UI95 211 aa22.89■■□□□ 1.25
SSR1-204ENST00000474597 hCG_1642624A0A1W2PR95 340 aa22.88■■□□□ 1.25
SSR1-204ENST00000474597 TTLL1O95922 423 aa22.88■■□□□ 1.25
SSR1-204ENST00000474597 NOVP48745 357 aa22.88■■□□□ 1.25
SSR1-204ENST00000474597 PKN1Q16512 942 aa22.88■■□□□ 1.25
SSR1-204ENST00000474597 CERKLQ49MI3 558 aaPredicted RBP22.88■■□□□ 1.25
SSR1-204ENST00000474597 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.88■■□□□ 1.25
SSR1-204ENST00000474597 KCNJ14Q9UNX9 436 aa22.88■■□□□ 1.25
SSR1-204ENST00000474597 RPS12P25398 132 aaKnown RBP22.87■■□□□ 1.25
SSR1-204ENST00000474597 MMP14P50281 582 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 ZSCAN23Q3MJ62 389 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 SPDYE2Q495Y8 402 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 STAG2Q8N3U4 1231 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 LZTS2Q9BRK4 669 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 VEZTQ9HBM0 779 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 TMEM63CQ9P1W3 806 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 IGKV6D-41A0A0C4DH26 115 aa22.87■■□□□ 1.25
SSR1-204ENST00000474597 PARP1P09874 1014 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms