RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 COG6Q9Y2V7 657 aa30.08■■■□□ 2.41
PKD1-211ENST00000474088 USP17L15C9J2P7 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L13C9JLJ4 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L11C9JVI0 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L18D6R9N7 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L22D6RA61 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L17D6RBQ6 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L19D6RCP7 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L20D6RJB6 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 POLR3DP05423 398 aaPredicted RBP30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP14P54578 494 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 USP17L24Q0WX57 530 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 PDE3AQ14432 1141 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 DIS3LQ8TF46 1054 aaKnown RBP30.07■■■□□ 2.4
PKD1-211ENST00000474088 KIAA1683Q9H0B3 1180 aa30.07■■■□□ 2.4
PKD1-211ENST00000474088 ZNF532Q9HCE3 1301 aa30.06■■■□□ 2.4
PKD1-211ENST00000474088 GOLIM4O00461 696 aa30.06■■■□□ 2.4
PKD1-211ENST00000474088 GPR142Q7Z601 462 aa30.06■■■□□ 2.4
PKD1-211ENST00000474088 USP6NLQ92738 828 aa30.06■■■□□ 2.4
PKD1-211ENST00000474088 DNAJC2Q99543 621 aaKnown RBP30.06■■■□□ 2.4
PKD1-211ENST00000474088 CRNKL1Q9BZJ0 848 aaKnown RBP30.06■■■□□ 2.4
PKD1-211ENST00000474088 PRO3102Q9H379 93 aa30.06■■■□□ 2.4
PKD1-211ENST00000474088 RAB11FIP3O75154 756 aa30.05■■■□□ 2.4
PKD1-211ENST00000474088 GABPAQ06546 454 aa30.05■■■□□ 2.4
PKD1-211ENST00000474088 MAP3K21Q5TCX8 1036 aa30.05■■■□□ 2.4
PKD1-211ENST00000474088 CATSPERGQ6ZRH7 1159 aa30.05■■■□□ 2.4
PKD1-211ENST00000474088 TRMT44Q8IYL2 757 aaKnown RBP30.05■■■□□ 2.4
PKD1-211ENST00000474088 ACER1Q8TDN7 264 aa30.05■■■□□ 2.4
PKD1-211ENST00000474088 RABGAP1Q9Y3P9 1069 aa30.05■■■□□ 2.4
PKD1-211ENST00000474088 GUCY1A2P33402 732 aa30.04■■■□□ 2.4
PKD1-211ENST00000474088 MORN1Q5T089 497 aa30.04■■■□□ 2.4
PKD1-211ENST00000474088 PLEKHH3Q7Z736 793 aa30.04■■■□□ 2.4
PKD1-211ENST00000474088 MCM9Q9NXL9 1143 aa30.04■■■□□ 2.4
PKD1-211ENST00000474088 TCRBV5S4A2TA0A5A2 114 aa30.03■■■□□ 2.4
PKD1-211ENST00000474088 CNMDO75829 334 aa30.03■■■□□ 2.4
PKD1-211ENST00000474088 PRKAR2AP13861 404 aaKnown RBP30.03■■■□□ 2.4
PKD1-211ENST00000474088 BCL11AQ9H165 835 aa30.03■■■□□ 2.4
PKD1-211ENST00000474088 VCAM1P19320 739 aa30.02■■■□□ 2.4
PKD1-211ENST00000474088 RGS2P41220 211 aa30.02■■■□□ 2.4
PKD1-211ENST00000474088 CHMP4BQ9H444 224 aaKnown RBP30.02■■■□□ 2.4
PKD1-211ENST00000474088 OGDHLQ9ULD0 1010 aa30.02■■■□□ 2.4
PKD1-211ENST00000474088 ZKSCAN1P17029 563 aaPredicted RBP30.01■■■□□ 2.39
PKD1-211ENST00000474088 MNX1P50219 401 aaPredicted RBP30.01■■■□□ 2.39
PKD1-211ENST00000474088 CCNA1P78396 465 aa30.01■■■□□ 2.39
PKD1-211ENST00000474088 SEPT2Q15019 361 aa30.01■■■□□ 2.39
PKD1-211ENST00000474088 LCORLQ8N3X6 602 aa30.01■■■□□ 2.39
PKD1-211ENST00000474088 SDR42E1Q8WUS8 393 aa30.01■■■□□ 2.39
PKD1-211ENST00000474088 EDC3Q96F86 508 aaKnown RBP30.01■■■□□ 2.39
PKD1-211ENST00000474088 NBPF3Q9H094 633 aa30.01■■■□□ 2.39
PKD1-211ENST00000474088 DCP1AQ9NPI6 582 aaPredicted RBP30.01■■■□□ 2.39
PKD1-211ENST00000474088 DDX60LQ5H9U9 1706 aaKnown RBP30.01■■■□□ 2.39
PKD1-211ENST00000474088 EVX2Q03828 476 aa30■■■□□ 2.39
PKD1-211ENST00000474088 CACNB2Q08289 660 aaPredicted RBP30■■■□□ 2.39
PKD1-211ENST00000474088 CWC22Q9HCG8 908 aaKnown RBP30■■■□□ 2.39
PKD1-211ENST00000474088 CCL14Q16627 93 aa29.99■■■□□ 2.39
PKD1-211ENST00000474088 LBX2Q6XYB7 198 aa29.99■■■□□ 2.39
PKD1-211ENST00000474088 BOLA2Q9H3K6 86 aa29.99■■■□□ 2.39
PKD1-211ENST00000474088 PAG1Q9NWQ8 432 aa29.99■■■□□ 2.39
PKD1-211ENST00000474088 APBA2Q99767 749 aa29.98■■■□□ 2.39
PKD1-211ENST00000474088 RPAP3Q9H6T3 665 aaPredicted RBP29.98■■■□□ 2.39
PKD1-211ENST00000474088 NAV1Q8NEY1 1877 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 MPHOSPH10O00566 681 aaKnown RBP29.97■■■□□ 2.39
PKD1-211ENST00000474088 GLRX3O76003 335 aaKnown RBP29.97■■■□□ 2.39
PKD1-211ENST00000474088 ATP5JP18859 108 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 MAP2K5Q13163 448 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 C11orf49Q9H6J7 331 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 ARMT1Q9H993 441 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 BTBD7Q9P203 1132 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 RCAN3Q9UKA8 241 aa29.97■■■□□ 2.39
PKD1-211ENST00000474088 CEP290O15078 2479 aa29.96■■■□□ 2.39
PKD1-211ENST00000474088 A0A1W2PRG0 241 aa29.96■■■□□ 2.39
PKD1-211ENST00000474088 CYP2D6P10635 497 aa29.96■■■□□ 2.39
PKD1-211ENST00000474088 ADD2P35612 726 aa29.96■■■□□ 2.39
PKD1-211ENST00000474088 SPDYE16A6NNV3 312 aaPredicted RBP29.95■■■□□ 2.39
PKD1-211ENST00000474088 SLFNL1Q499Z3 407 aa29.95■■■□□ 2.39
PKD1-211ENST00000474088 WDR78Q5VTH9 848 aa29.95■■■□□ 2.39
PKD1-211ENST00000474088 STAP2Q9UGK3 403 aa29.95■■■□□ 2.39
PKD1-211ENST00000474088 A0A1W2PPC1 479 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 SLC15A5A6NIM6 579 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 PRKAB2O43741 272 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 PTPREP23469 700 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 CCND3P30281 292 aaPredicted RBP29.94■■■□□ 2.38
PKD1-211ENST00000474088 C7orf61Q8IZ16 206 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 SLC44A5Q8NCS7 719 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 HAUS7Q99871 368 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 ATP8A2Q9NTI2 1148 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 SWAP70Q9UH65 585 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 ALPK3Q96L96 1907 aa29.94■■■□□ 2.38
PKD1-211ENST00000474088 MBD4O95243 580 aa29.93■■■□□ 2.38
PKD1-211ENST00000474088 COG2Q14746 738 aa29.93■■■□□ 2.38
PKD1-211ENST00000474088 LHX8Q68G74 356 aa29.93■■■□□ 2.38
PKD1-211ENST00000474088 TMEM179Q6ZVK1 233 aa29.93■■■□□ 2.38
PKD1-211ENST00000474088 DYNLL2Q96FJ2 89 aa29.93■■■□□ 2.38
PKD1-211ENST00000474088 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.93■■■□□ 2.382e-6■■■■□ 24.1
PKD1-211ENST00000474088 HOXC10Q9NYD6 342 aa29.92■■■□□ 2.38
PKD1-211ENST00000474088 IVNS1ABPQ9Y6Y0 642 aa29.92■■■□□ 2.38
PKD1-211ENST00000474088 FLRT1Q9NZU1 646 aa29.91■■■□□ 2.38
PKD1-211ENST00000474088 TRIOBPQ9H2D6 2365 aa29.91■■■□□ 2.38
PKD1-211ENST00000474088 GRB14Q14449 540 aa29.9■■■□□ 2.38
PKD1-211ENST00000474088 UBE3CQ15386 1083 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms