RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 PBX2P40425 430 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 RHBDL3P58872 404 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 LRRC41Q15345 812 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 WDR78Q5VTH9 848 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 OLFML2BQ68BL8 750 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 NPLOC4Q8TAT6 608 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSBP1-209ENST00000473783 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 NDUFB9Q9Y6M9 179 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 REV3LO60673 3130 aa13.12□□□□□ -0.31
SSBP1-209ENST00000473783 LRRC37A2A6NM11 1700 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 MRE11P49959 708 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 RAB30Q15771 203 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 C11orf16Q9NQ32 467 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 GINM1Q9NU53 330 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 TMEM39AQ9NV64 488 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 BRWD1Q9NSI6 2320 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 IL16Q14005 1332 aa13.11□□□□□ -0.31
SSBP1-209ENST00000473783 EYA2O00167 538 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 ERC2O15083 957 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 VAMP4O75379 141 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 CNMDO75829 334 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 KCNQ1P51787 676 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 TFF2Q03403 129 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 SPTY2D1Q68D10 685 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-209ENST00000473783 SLC4A10Q6U841 1118 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 MSRAQ9UJ68 235 aa13.1□□□□□ -0.31
SSBP1-209ENST00000473783 PDS5AQ29RF7 1337 aaKnown RBP13.1□□□□□ -0.31
SSBP1-209ENST00000473783 GRXCR1A8MXD5 290 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
SSBP1-209ENST00000473783 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.31
SSBP1-209ENST00000473783 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 HERVK_113Q902F9 699 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 TOX2Q96NM4 488 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 TRANK1O15050 2925 aa13.09□□□□□ -0.31
SSBP1-209ENST00000473783 DCDC2CA8MYV0 355 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 TIMP1P01033 207 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 PHKA1P46020 1223 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 FAAP100Q0VG06 881 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 ANKRD33Q7Z3H0 272 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 DPP9Q86TI2 863 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 SLC28A3Q9HAS3 691 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 PI4KBQ9UBF8 816 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 PSRC1Q6PGN9 363 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-209ENST00000473783 RNF180Q86T96 592 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 DHX36Q9H2U1 1008 aaKnown RBP13.07□□□□□ -0.32
SSBP1-209ENST00000473783 CDK5RAP2Q96SN8 1893 aa13.07□□□□□ -0.32
SSBP1-209ENST00000473783 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
SSBP1-209ENST00000473783 FOCADQ5VW36 1801 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 ZDBF2Q9HCK1 2354 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 A0A1W2PQ45 241 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-209ENST00000473783 A0A1W2PQY0 241 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 FAM86C2PA6NEL3 165 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 STRNO43815 780 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 ADORA2AP29274 412 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 JAG1P78504 1218 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 MECOMQ03112 1051 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 RASGRF1Q13972 1273 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 ATG9AQ7Z3C6 839 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 XPNPEP3Q9NQH7 507 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 SLC5A4Q9NY91 659 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 TBX21Q9UL17 535 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 COG5Q9UP83 839 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
SSBP1-209ENST00000473783 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
SSBP1-209ENST00000473783 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
SSBP1-209ENST00000473783 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
SSBP1-209ENST00000473783 LDHCP07864 332 aa13.05□□□□□ -0.32
SSBP1-209ENST00000473783 RARBP10826 455 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms