RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 FAM110CQ1W6H9 321 aa15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 LRRFIP1Q32MZ4 808 aaKnown RBP15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 LCORLQ8N3X6 602 aa15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 RWDD1Q9H446 243 aaPredicted RBP15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 AS3MTQ9HBK9 375 aa15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 SERPINB13Q9UIV8 391 aa15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
SHROOM3-204ENST00000473602 BAZ2AQ9UIF9 1905 aaKnown RBP15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 USP17L5A8MUK1 530 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 HMGCRP04035 888 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 ZFYP08048 801 aaPredicted RBP15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 TRIM32Q13049 653 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 SPP2Q13103 211 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 Q7L0L9 218 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 DEFB123Q8N688 67 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 ANKLE1Q8NAG6 615 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 ZNF280CQ8ND82 737 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 PI4K2BQ8TCG2 481 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 ATP8A2Q9NTI2 1148 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 GJD2Q9UKL4 321 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 SALL3Q9BXA9 1300 aa15.6■□□□□ 0.09
SHROOM3-204ENST00000473602 MBD4O95243 580 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 POLR3DP05423 398 aaPredicted RBP15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 SYN1P17600 705 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 RRP1BQ14684 758 aaKnown RBP15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 TSHZ3Q63HK5 1081 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 GPR153Q6NV75 609 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 TATDN1Q6P1N9 297 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 SMC5Q8IY18 1101 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 PROCA1Q8NCQ7 364 aaPredicted RBP15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 EXOC6Q8TAG9 804 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 DDRGK1Q96HY6 314 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 HMX1Q9NP08 348 aaPredicted RBP15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 DCP1AQ9NPI6 582 aaPredicted RBP15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 MCM9Q9NXL9 1143 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 RPTORQ8N122 1335 aa15.59■□□□□ 0.09
SHROOM3-204ENST00000473602 GCLCP48506 637 aaPredicted RBP15.58■□□□□ 0.08
SHROOM3-204ENST00000473602 OTUD7AQ8TE49 926 aaPredicted RBP15.58■□□□□ 0.08
SHROOM3-204ENST00000473602 SDR42E1Q8WUS8 393 aa15.58■□□□□ 0.08
SHROOM3-204ENST00000473602 APPBP2Q92624 585 aa15.58■□□□□ 0.08
SHROOM3-204ENST00000473602 WDR18Q9BV38 432 aa15.58■□□□□ 0.08
SHROOM3-204ENST00000473602 MGAMO43451 1857 aa15.58■□□□□ 0.08
SHROOM3-204ENST00000473602 RNF113AO15541 343 aaKnown RBP15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 MAGEA10P43363 369 aaPredicted RBP15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 HMGCS2P54868 508 aa15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 LRIT3Q3SXY7 679 aa15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 SH3D19Q5HYK7 790 aa15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 AMOTL1Q8IY63 956 aa15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 ASCC2Q9H1I8 757 aaPredicted RBP15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 C11orf49Q9H6J7 331 aa15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 ZBTB21Q9ULJ3 1066 aa15.57■□□□□ 0.08
SHROOM3-204ENST00000473602 DOCK3Q8IZD9 2030 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 CYP2B6P20813 491 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 PLCD1P51178 756 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 GABPAQ06546 454 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 PABPC4Q13310 644 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 SLFNL1Q499Z3 407 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 PUS7LQ9H0K6 701 aaKnown RBP15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 MTMR10Q9NXD2 777 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 SWAP70Q9UH65 585 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 OGDHLQ9ULD0 1010 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 STXBP5LQ9Y2K9 1186 aa15.56■□□□□ 0.08
SHROOM3-204ENST00000473602 C19orf81C9J6K1 198 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 PRKAB2O43741 272 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 GDF11O95390 407 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 CHGBP05060 677 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 SHMT1P34896 483 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 PDE1AP54750 535 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 CERKLQ49MI3 558 aaPredicted RBP15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 TDHQ8IZJ6 230 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 TRIB2Q92519 343 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 UBE2OQ9C0C9 1292 aaKnown RBP15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 SLC4A4Q9Y6R1 1079 aa15.55■□□□□ 0.08
SHROOM3-204ENST00000473602 UNC80Q8N2C7 3258 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 GH2P01242 217 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 GNAT2P19087 354 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 BACE1P56817 501 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 JAG1P78504 1218 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 ABCB5Q2M3G0 1257 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 TICAM2Q86XR7 235 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 STRBPQ96SI9 672 aaKnown RBP15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 FSD1Q9BTV5 496 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 CABP5Q9NP86 173 aa15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 ARPP21Q9UBL0 812 aaPredicted RBP15.54■□□□□ 0.08
SHROOM3-204ENST00000473602 USP17L10C9JJH3 530 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 PEX10O60683 326 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 IGHDP01880 384 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 MTMR2Q13614 643 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 MAP3K21Q5TCX8 1036 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 C12orf60Q5U649 245 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 OSBP2Q969R2 916 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
SHROOM3-204ENST00000473602 TMOD4Q9NZQ9 345 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms