RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 VPS18Q9P253 973 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 RIPOR2Q9Y4F9 1068 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 BTBD18B2RXH4 712 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 CYLC1P35663 651 aaPredicted RBP6.92□□□□□ -1.3
HERC4-209ENST00000473533 PBX1P40424 430 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 MCAMP43121 646 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 PDE4BQ07343 736 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 FAM114A1Q8IWE2 563 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 RETREG2Q8NC44 543 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 LZTFL1Q9NQ48 299 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 STRN4Q9NRL3 753 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
HERC4-209ENST00000473533 FEZ2Q9UHY8 353 aaPredicted RBP6.92□□□□□ -1.3
HERC4-209ENST00000473533 MYO6Q9UM54 1294 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 L1RE1Q9UN81 338 aa6.92□□□□□ -1.3
HERC4-209ENST00000473533 KCPQ6ZWJ8 1503 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 A0A0G2JLW4 131 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 H7C1D1 291 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 KRT86O43790 486 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 GTPBP6O43824 516 aaPredicted RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 RANBP6O60518 1105 aaKnown RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 SASH3O75995 380 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 PDE8BO95263 885 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 CTSWP56202 376 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 RBL2Q08999 1139 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 PAK1Q13153 545 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 RIC1Q4ADV7 1423 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 ECM29Q5VYK3 1845 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 SH3RF1Q7Z6J0 888 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 FOXP4Q8IVH2 680 aaPredicted RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 PPM1EQ8WY54 764 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 CCDC102AQ96A19 550 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 NUP88Q99567 741 aaPredicted RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 A0A1W2PQC6 194 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 ANO9A1A5B4 782 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 LRRC10BA6NIK2 292 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 PDE8AO60658 829 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.3
HERC4-209ENST00000473533 CATIPQ7Z7H3 387 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 SRLQ86TD4 932 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 FANCBQ8NB91 859 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 SYTL4Q96C24 671 aaPredicted RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 MAGEF1Q9HAY2 307 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 CHD4Q14839 1912 aa6.91□□□□□ -1.3
HERC4-209ENST00000473533 COL22A1Q8NFW1 1626 aaPredicted RBP6.91□□□□□ -1.3
HERC4-209ENST00000473533 SOWAHDA6NJG2 315 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 DDAH1O94760 285 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 CLSTN1O94985 981 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 ITGA6P23229 1130 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 EEF1GP26641 437 aaKnown RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 USP8P40818 1118 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 CUL4BQ13620 913 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 MCM6Q14566 821 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 CASP8Q14790 479 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 GBP6Q6ZN66 633 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 RAB11FIP4Q86YS3 637 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 PAGE5Q96GU1 130 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 AIFM3Q96NN9 605 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 CRACR2AQ9BSW2 395 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 CSRNP2Q9H175 543 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 MRPL44Q9H9J2 332 aaKnown RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 PDE11AQ9HCR9 933 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 SAMSN1Q9NSI8 373 aaKnown RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 RRP15Q9Y3B9 282 aaKnown RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 ARAP2Q8WZ64 1704 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 MYO1CO00159 1063 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 A1BGP04217 495 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 BMP6P22004 513 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 CALML3P27482 149 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 AARSP49588 968 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERC4-209ENST00000473533 DPYDQ12882 1025 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 ARL6IP4Q66PJ3 421 aaKnown RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 IQCA1Q86XH1 822 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 SLC35F6Q8N357 371 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 OR8K1Q8NGG5 319 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 AFAP1L1Q8TED9 768 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 DESI2Q9BSY9 194 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 ANKZF1Q9H8Y5 726 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
HERC4-209ENST00000473533 ABHD10Q9NUJ1 306 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 ZSWIM5Q9P217 1185 aa6.9□□□□□ -1.3
HERC4-209ENST00000473533 PSMD14O00487 310 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 MAGEA9P43362 315 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 TOB1P50616 345 aaPredicted RBP6.9□□□□□ -1.31
HERC4-209ENST00000473533 COPB1P53618 953 aaKnown RBP6.9□□□□□ -1.31
HERC4-209ENST00000473533 ZNF658Q5TYW1 1059 aaPredicted RBP6.9□□□□□ -1.31
HERC4-209ENST00000473533 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 TRMT44Q8IYL2 757 aaKnown RBP6.9□□□□□ -1.31
HERC4-209ENST00000473533 CCDC170Q8IYT3 715 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 SPATA5Q8NB90 893 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 NBPF3Q9H094 633 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 GJB4Q9NTQ9 266 aa6.9□□□□□ -1.31
HERC4-209ENST00000473533 GNL3LQ9NVN8 582 aaKnown RBP6.9□□□□□ -1.31
HERC4-209ENST00000473533 TMOD3Q9NYL9 352 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms