RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 CYP2D6P10635 497 aa11.53□□□□□ -0.56
BRD3-205ENST00000473349 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRD3-205ENST00000473349 RAB3GAP1Q15042 981 aa11.53□□□□□ -0.56
BRD3-205ENST00000473349 CCL14Q16627 93 aa11.53□□□□□ -0.56
BRD3-205ENST00000473349 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
BRD3-205ENST00000473349 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
BRD3-205ENST00000473349 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
BRD3-205ENST00000473349 RIOK1Q9BRS2 568 aaKnown RBP11.53□□□□□ -0.56
BRD3-205ENST00000473349 MORF4L1Q9UBU8 362 aa11.53□□□□□ -0.56
BRD3-205ENST00000473349 MYH1P12882 1939 aa11.52□□□□□ -0.56
BRD3-205ENST00000473349 LAMA3Q16787 3333 aa11.52□□□□□ -0.56
BRD3-205ENST00000473349 GOLIM4O00461 696 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 HMGCRP04035 888 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 PDE6AP16499 860 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
BRD3-205ENST00000473349 GUCY1A2P33402 732 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 SHMT1P34896 483 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 NUBP1P53384 320 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 MAP3K12Q12852 859 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 SLC44A5Q8NCS7 719 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 GPRC5AQ8NFJ5 357 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
BRD3-205ENST00000473349 ALPK3Q96L96 1907 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 PRKAB2O43741 272 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 CNMDO75829 334 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
BRD3-205ENST00000473349 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 ERVK-24P63145 666 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 C20orf194Q5TEA3 1177 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 TMED8Q6PL24 325 aaPredicted RBP11.51□□□□□ -0.57
BRD3-205ENST00000473349 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 LCORLQ8N3X6 602 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 SDR42E1Q8WUS8 393 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 FEZ1Q99689 392 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 HTATIP2Q9BUP3 242 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 SERPINB13Q9UIV8 391 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 ZNF532Q9HCE3 1301 aa11.51□□□□□ -0.57
BRD3-205ENST00000473349 DDX60LQ5H9U9 1706 aaKnown RBP11.51□□□□□ -0.57
BRD3-205ENST00000473349 CYP2D7A0A087X1C5 515 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 MAGEB6P1A0A0J9YX57 407 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 TCRBV5S4A2TA0A5A2 114 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 EVI5O60447 810 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 SEPT2Q15019 361 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 ABCB5Q2M3G0 1257 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 CERKLQ49MI3 558 aaPredicted RBP11.5□□□□□ -0.57
BRD3-205ENST00000473349 KIAA1755Q5JYT7 1200 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 CERS3Q8IU89 383 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 ERC1Q8IUD2 1116 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 DYNLL2Q96FJ2 89 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 PRO3102Q9H379 93 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 ARMT1Q9H993 441 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 ZBTB40Q9NUA8 1239 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
BRD3-205ENST00000473349 NAV1Q8NEY1 1877 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 SMARCA5O60264 1052 aaPredicted RBP11.49□□□□□ -0.57
BRD3-205ENST00000473349 POLR3DP05423 398 aaPredicted RBP11.49□□□□□ -0.57
BRD3-205ENST00000473349 VCAM1P19320 739 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 CCND3P30281 292 aaPredicted RBP11.49□□□□□ -0.57
BRD3-205ENST00000473349 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
BRD3-205ENST00000473349 WDR78Q5VTH9 848 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 USP6NLQ92738 828 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 EHD4Q9H223 541 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 BOLA2Q9H3K6 86 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
BRD3-205ENST00000473349 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 MCM9Q9NXL9 1143 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 FLRT1Q9NZU1 646 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 BTBD7Q9P203 1132 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
BRD3-205ENST00000473349 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
BRD3-205ENST00000473349 MPHOSPH10O00566 681 aaKnown RBP11.48□□□□□ -0.57
BRD3-205ENST00000473349 SOX1O00570 391 aaPredicted RBP11.48□□□□□ -0.57
BRD3-205ENST00000473349 IFIT2P09913 472 aaKnown RBP11.48□□□□□ -0.57
BRD3-205ENST00000473349 SYN1P17600 705 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 GABPAQ06546 454 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 MORN1Q5T089 497 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
BRD3-205ENST00000473349 KIF1BPQ96EK5 621 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 KIAA1683Q9H0B3 1180 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
BRD3-205ENST00000473349 DCP1AQ9NPI6 582 aaPredicted RBP11.48□□□□□ -0.57
BRD3-205ENST00000473349 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
BRD3-205ENST00000473349 PFASO15067 1338 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
BRD3-205ENST00000473349 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms