RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ATRNL1Q5VV63 1379 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 A0A0D9SFI3 127 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 DDTLA6NHG4 134 aaPredicted RBP10.92□□□□□ -0.66
SMC4-214ENST00000472991 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 GPAA1O43292 621 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 PRKAB2O43741 272 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 HSPA6P17066 643 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 GGCXP38435 758 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
SMC4-214ENST00000472991 PRKG1Q13976 671 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 ZSCAN29Q8IWY8 852 aaPredicted RBP10.92□□□□□ -0.66
SMC4-214ENST00000472991 SDR42E1Q8WUS8 393 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 GBA2Q9HCG7 927 aaPredicted RBP10.92□□□□□ -0.66
SMC4-214ENST00000472991 FZD1Q9UP38 647 aa10.92□□□□□ -0.66
SMC4-214ENST00000472991 TLL1O43897 1013 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 HTRA3P83110 453 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 TTLL12Q14166 644 aaPredicted RBP10.91□□□□□ -0.66
SMC4-214ENST00000472991 SLC4A8Q2Y0W8 1093 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 SUPT20HL1Q3ZLR7 823 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 MOB2Q70IA6 237 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 FAM227BQ96M60 508 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 CSRNP1Q96S65 589 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 DIAPH3Q9NSV4 1193 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 SAP30BPQ9UHR5 308 aaKnown RBP10.91□□□□□ -0.66
SMC4-214ENST00000472991 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
SMC4-214ENST00000472991 BMP2KLQ5H9B9 411 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 TICAM2Q86XR7 235 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 C2orf69Q8N8R5 385 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 STRBPQ96SI9 672 aaKnown RBP10.9□□□□□ -0.66
SMC4-214ENST00000472991 DCP1AQ9NPI6 582 aaPredicted RBP10.9□□□□□ -0.66
SMC4-214ENST00000472991 HELLSQ9NRZ9 838 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 PALD1Q9ULE6 856 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 ABT1Q9ULW3 272 aaKnown RBP10.9□□□□□ -0.66
SMC4-214ENST00000472991 ANGEL1Q9UNK9 670 aaKnown RBP10.9□□□□□ -0.66
SMC4-214ENST00000472991 THSD7BQ9C0I4 1608 aa10.9□□□□□ -0.66
SMC4-214ENST00000472991 HIP1O00291 1037 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 PPP1R12BO60237 982 aaPredicted RBP10.89□□□□□ -0.67
SMC4-214ENST00000472991 SLURP2P0DP57 97 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 HUNKP57058 714 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 FKBP1BP68106 108 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 LAPTM4AQ15012 233 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 DCAF15Q66K64 600 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 CWC27Q6UX04 472 aaKnown RBP10.89□□□□□ -0.67
SMC4-214ENST00000472991 MIGA2Q7L4E1 593 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 ARMC9Q7Z3E5 817 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 ZNF589Q86UQ0 364 aaPredicted RBP10.89□□□□□ -0.67
SMC4-214ENST00000472991 HOOK2Q96ED9 719 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 MCM9Q9NXL9 1143 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
SMC4-214ENST00000472991 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 MYH4Q9Y623 1939 aa10.89□□□□□ -0.67
SMC4-214ENST00000472991 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
SMC4-214ENST00000472991 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 GSG1L2A8MUP6 293 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 UBE2Q2LH0YL09 131 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
SMC4-214ENST00000472991 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 GNAT2P19087 354 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 SAPCD2Q86UD0 394 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 DHX36Q9H2U1 1008 aaKnown RBP10.88□□□□□ -0.67
SMC4-214ENST00000472991 EPB41L4AQ9HCS5 686 aaPredicted RBP10.88□□□□□ -0.67
SMC4-214ENST00000472991 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
SMC4-214ENST00000472991 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
SMC4-214ENST00000472991 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 POLR3DP05423 398 aaPredicted RBP10.87□□□□□ -0.67
SMC4-214ENST00000472991 CYP2D6P10635 497 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 CHMLP26374 656 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
SMC4-214ENST00000472991 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 Q6ZNB5 142 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 NLRP7Q8WX94 980 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 WRNIP1Q96S55 665 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 IL25Q9H293 177 aa10.87□□□□□ -0.67
SMC4-214ENST00000472991 RAD50Q92878 1312 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 CEP350Q5VT06 3117 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 RASSF10A6NK89 507 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 FOXP2O15409 715 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 GFRA3O60609 400 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 APPP05067 770 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 INPP5BP32019 993 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 TDO2P48775 406 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 PLCD1P51178 756 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
SMC4-214ENST00000472991 TTC6Q86TZ1 520 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 IFNL3Q8IZI9 196 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 CRACR2BQ8N4Y2 399 aaPredicted RBP10.86□□□□□ -0.67
SMC4-214ENST00000472991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMC4-214ENST00000472991 KLRG1Q96E93 195 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms