RNA–Protein interactions for RNA: ENST00000472958.5

EXD3-204, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 4

Gene EXD3, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-204ENST00000472958 USP17L22D6RA61 530 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 USP17L17D6RBQ6 530 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 USP17L19D6RCP7 530 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 USP17L20D6RJB6 530 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 MBD4O95243 580 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 SGPL1O95470 568 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 HMGCRP04035 888 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 ERVK-9P63128 1117 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 ERVK-24P63145 666 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 USP17L24Q0WX57 530 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 UBE3CQ15386 1083 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 ZYXQ15942 572 aaKnown RBP23.16■■□□□ 1.3
EXD3-204ENST00000472958 ATP8A2Q9NTI2 1148 aa23.16■■□□□ 1.3
EXD3-204ENST00000472958 SMARCA5O60264 1052 aaPredicted RBP23.15■■□□□ 1.3
EXD3-204ENST00000472958 VCAM1P19320 739 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 MAPK4P31152 587 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 GUCY1A2P33402 732 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 EVX2Q03828 476 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 ACER1Q8TDN7 264 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 SOCS4Q8WXH5 440 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 SWAP70Q9UH65 585 aa23.15■■□□□ 1.3
EXD3-204ENST00000472958 PEX10O60683 326 aa23.14■■□□□ 1.29
EXD3-204ENST00000472958 FARP2O94887 1054 aaPredicted RBP23.14■■□□□ 1.29
EXD3-204ENST00000472958 SLFNL1Q499Z3 407 aa23.14■■□□□ 1.29
EXD3-204ENST00000472958 ZSCAN25Q6NSZ9 544 aa23.14■■□□□ 1.29
EXD3-204ENST00000472958 PAGR1Q9BTK6 254 aa23.14■■□□□ 1.29
EXD3-204ENST00000472958 DCTPP1Q9H773 170 aa23.14■■□□□ 1.29
EXD3-204ENST00000472958 ECHDC1Q9NTX5 307 aa23.14■■□□□ 1.29
EXD3-204ENST00000472958 CYP2D6P10635 497 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 SEPT2Q15019 361 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 POTEEQ6S8J3 1075 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 CATSPERGQ6ZRH7 1159 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 DEFB118Q96PH6 123 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 HTATIP2Q9BUP3 242 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.13■■□□□ 1.29
EXD3-204ENST00000472958 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
EXD3-204ENST00000472958 PRKAB2O43741 272 aa23.12■■□□□ 1.29
EXD3-204ENST00000472958 XRCC5P13010 732 aaKnown RBP23.12■■□□□ 1.29
EXD3-204ENST00000472958 LBX2Q6XYB7 198 aa23.12■■□□□ 1.29
EXD3-204ENST00000472958 NUDT12Q9BQG2 462 aa23.12■■□□□ 1.29
EXD3-204ENST00000472958 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
EXD3-204ENST00000472958 PORCNQ9H237 461 aa23.12■■□□□ 1.29
EXD3-204ENST00000472958 MPHOSPH10O00566 681 aaKnown RBP23.11■■□□□ 1.29
EXD3-204ENST00000472958 Q3C1V9 767 aa23.11■■□□□ 1.29
EXD3-204ENST00000472958 TMEM179Q6ZVK1 233 aa23.11■■□□□ 1.29
EXD3-204ENST00000472958 SLC44A5Q8NCS7 719 aa23.11■■□□□ 1.29
EXD3-204ENST00000472958 TRIB2Q92519 343 aa23.11■■□□□ 1.29
EXD3-204ENST00000472958 GPATCH3Q96I76 525 aa23.11■■□□□ 1.29
EXD3-204ENST00000472958 A0A0G2JMZ2 1700 aa23.11■■□□□ 1.29
EXD3-204ENST00000472958 CNMDO75829 334 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 CHGBP05060 677 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 HABP4Q5JVS0 413 aaKnown RBP23.1■■□□□ 1.29
EXD3-204ENST00000472958 C12orf60Q5U649 245 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 GPR142Q7Z601 462 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 CCAR1Q8IX12 1150 aaKnown RBP23.1■■□□□ 1.29
EXD3-204ENST00000472958 AMOTL1Q8IY63 956 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 USP6NLQ92738 828 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
EXD3-204ENST00000472958 RPAP3Q9H6T3 665 aaPredicted RBP23.1■■□□□ 1.29
EXD3-204ENST00000472958 RPTORQ8N122 1335 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 A0A1W2PRG0 241 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 H0YGN5 161 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 TFRCP02786 760 aaKnown RBP23.09■■□□□ 1.29
EXD3-204ENST00000472958 CYP2B6P20813 491 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 CCNA1P78396 465 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 PLEKHH3Q7Z736 793 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 TRMT44Q8IYL2 757 aaKnown RBP23.09■■□□□ 1.29
EXD3-204ENST00000472958 DYNLL2Q96FJ2 89 aa23.09■■□□□ 1.29
EXD3-204ENST00000472958 HMX1Q9NP08 348 aaPredicted RBP23.09■■□□□ 1.29
EXD3-204ENST00000472958 TRIM32Q13049 653 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 MORN1Q5T089 497 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 MAP3K21Q5TCX8 1036 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 KBTBD3Q8NAB2 608 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 DPF3Q92784 378 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 CCDC17Q96LX7 622 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 PUS7LQ9H0K6 701 aaKnown RBP23.08■■□□□ 1.29
EXD3-204ENST00000472958 SLC4A4Q9Y6R1 1079 aa23.08■■□□□ 1.29
EXD3-204ENST00000472958 RLFQ13129 1914 aa23.08■■□□□ 1.28
EXD3-204ENST00000472958 SPDYE16A6NNV3 312 aaPredicted RBP23.07■■□□□ 1.28
EXD3-204ENST00000472958 USP17L12C9JPN9 530 aa23.07■■□□□ 1.28
EXD3-204ENST00000472958 USP17L21D6R901 530 aa23.07■■□□□ 1.28
EXD3-204ENST00000472958 RGS2P41220 211 aa23.07■■□□□ 1.28
EXD3-204ENST00000472958 C16orf86Q6ZW13 317 aa23.07■■□□□ 1.28
EXD3-204ENST00000472958 ANKLE1Q8NAG6 615 aa23.07■■□□□ 1.28
EXD3-204ENST00000472958 APBA2Q99767 749 aa23.07■■□□□ 1.28
EXD3-204ENST00000472958 CWC22Q9HCG8 908 aaKnown RBP23.07■■□□□ 1.28
EXD3-204ENST00000472958 CYP2D7A0A087X1C5 515 aa23.06■■□□□ 1.28
EXD3-204ENST00000472958 GLRX3O76003 335 aaKnown RBP23.06■■□□□ 1.28
EXD3-204ENST00000472958 AKR1B1P15121 316 aa23.06■■□□□ 1.28
EXD3-204ENST00000472958 ZKSCAN1P17029 563 aaPredicted RBP23.06■■□□□ 1.28
EXD3-204ENST00000472958 ICA1Q05084 483 aa23.06■■□□□ 1.28
EXD3-204ENST00000472958 SH2D4AQ9H788 454 aa23.06■■□□□ 1.28
EXD3-204ENST00000472958 ARHGEF10LQ9HCE6 1279 aa23.06■■□□□ 1.28
EXD3-204ENST00000472958 ARPP21Q9UBL0 812 aaPredicted RBP23.06■■□□□ 1.28
EXD3-204ENST00000472958 ZNF236Q9UL36 1845 aa23.05■■□□□ 1.28
EXD3-204ENST00000472958 PRKAR2AP13861 404 aaKnown RBP23.05■■□□□ 1.28
EXD3-204ENST00000472958 CDK8P49336 464 aa23.05■■□□□ 1.28
EXD3-204ENST00000472958 LPAR1Q92633 364 aa23.05■■□□□ 1.28
EXD3-204ENST00000472958 BTBD7Q9P203 1132 aa23.05■■□□□ 1.28
EXD3-204ENST00000472958 TMX2Q9Y320 296 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms