RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 TFCP2Q12800 502 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
SMURF1-203ENST00000472627 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 TGFBRAP1Q8WUH2 860 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 NDUFB9Q9Y6M9 179 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 FLT1P17948 1338 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 SPTBN5Q9NRC6 3674 aaKnown RBP17.12■□□□□ 0.33
SMURF1-203ENST00000472627 EYSQ5T1H1 3165 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 ANP32CO43423 234 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 IGSF3O75054 1194 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 CYBAP13498 195 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
SMURF1-203ENST00000472627 SNX17Q15036 470 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 TRIM60Q495X7 471 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 OLFML2BQ68BL8 750 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
SMURF1-203ENST00000472627 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 E9PSI1 815 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 SEPT4O43236 478 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 STRNO43815 780 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 GH2P01242 217 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 PPP4CP60510 307 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 ZYXQ15942 572 aaKnown RBP17.1■□□□□ 0.33
SMURF1-203ENST00000472627 C1orf53Q5VUE5 145 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 DNAJC18Q9H819 358 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 PALD1Q9ULE6 856 aa17.1■□□□□ 0.33
SMURF1-203ENST00000472627 CNMDO75829 334 aa17.09■□□□□ 0.33
SMURF1-203ENST00000472627 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
SMURF1-203ENST00000472627 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
SMURF1-203ENST00000472627 IL27Q8NEV9 243 aa17.09■□□□□ 0.33
SMURF1-203ENST00000472627 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
SMURF1-203ENST00000472627 JAG1P78504 1218 aa17.08■□□□□ 0.32
SMURF1-203ENST00000472627 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
SMURF1-203ENST00000472627 NPLOC4Q8TAT6 608 aa17.08■□□□□ 0.32
SMURF1-203ENST00000472627 KIAA1683Q9H0B3 1180 aa17.08■□□□□ 0.32
SMURF1-203ENST00000472627 CABP5Q9NP86 173 aa17.08■□□□□ 0.32
SMURF1-203ENST00000472627 PRUNE2Q8WUY3 3088 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
SMURF1-203ENST00000472627 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
SMURF1-203ENST00000472627 GNAI3P08754 354 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 CLTBP09497 229 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 RAG1P15918 1043 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 VCAM1P19320 739 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 ADORA2AP29274 412 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 ADCYAP1R1P41586 468 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 TRPV1Q8NER1 839 aa17.07■□□□□ 0.32
SMURF1-203ENST00000472627 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
SMURF1-203ENST00000472627 GAS2L1Q99501 681 aaPredicted RBP17.07■□□□□ 0.32
SMURF1-203ENST00000472627 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
SMURF1-203ENST00000472627 RLFQ13129 1914 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 SIPA1L1O43166 1804 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 DNAJB2P25686 324 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 MCAMP43121 646 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 TLE2Q04725 743 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 FPGSQ05932 587 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 POTEEQ6S8J3 1075 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 RNF180Q86T96 592 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 FERMT2Q96AC1 680 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 FAM122AQ96E09 287 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 HOXC10Q9NYD6 342 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
SMURF1-203ENST00000472627 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 TRIM43BA6NCK2 446 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-203ENST00000472627 RARBP10826 455 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 USP5P45974 858 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMURF1-203ENST00000472627 LRRC41Q15345 812 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 ABCB5Q2M3G0 1257 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-203ENST00000472627 CERKLQ49MI3 558 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-203ENST00000472627 ANO1Q5XXA6 986 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 SHCBP1Q8NEM2 672 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 TRIM43Q96BQ3 446 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-203ENST00000472627 ZNF576Q9H609 170 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
SMURF1-203ENST00000472627 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
SMURF1-203ENST00000472627 PLA2G5P39877 138 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 MTX1Q13505 466 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 GRIN2CQ14957 1233 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 TIFAQ96CG3 184 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 MEIS3Q99687 375 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 EHD4Q9H223 541 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 MROH8Q9H579 483 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 THEGQ9P2T0 379 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 NRBP1Q9UHY1 535 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms