RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 CTR9Q6PD62 1173 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 KRBA2Q6ZNG9 492 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 RNF41Q9H4P4 317 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 SLC12A7Q9Y666 1083 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
SCAMP4-207ENST00000472442 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 CCP110O43303 1012 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 TBC1D8O95759 1140 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 GRIK5Q16478 980 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 FAM177A1Q8N128 213 aaPredicted RBP15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 GOLGA8FQ08AF8 430 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 GOLGA8DPQ0D2H9 430 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 STK38Q15208 465 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 UBXN6Q9BZV1 441 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 RTEL1Q9NZ71 1219 aa15.13■□□□□ 0.01
SCAMP4-207ENST00000472442 A0A1W2PQ27 194 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 A0A1W2PQ64 194 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 A0A1W2PQD8 194 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 KIF28PB7ZC32 967 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 NLRP12P59046 1061 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 C15orf52Q6ZUT6 534 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 CLIC4Q9Y696 253 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 KLRG2A4D1S0 409 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 USP17L12C9JPN9 530 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 USP17L21D6R901 530 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 PTPN21Q16825 1174 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 LINC00301Q8NCQ3 95 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 DUOX1Q9NRD9 1551 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 FGRP09769 529 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 HOXA10P31260 410 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 WTAPQ15007 396 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 CC2D1AQ6P1N0 951 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 REXO1L1PQ8IX06 675 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 DPF2Q92785 391 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 MTA3Q9BTC8 594 aa15.12■□□□□ 0.01
SCAMP4-207ENST00000472442 NID2Q14112 1375 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 MAST2Q6P0Q8 1798 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 SEC23AQ15436 765 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 MUM1L1Q5H9M0 696 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 ALG1Q9BT22 464 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 CCDC88AQ3V6T2 1871 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 PRDM1O75626 825 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 CDKL5O76039 1030 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 GNL2Q13823 731 aaKnown RBP15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 AKT1S1Q96B36 256 aa15.11■□□□□ 0.01
SCAMP4-207ENST00000472442 PLSCR1O15162 318 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 ATP8B1O43520 1251 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 TPM1P09493 284 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 KIF23Q02241 960 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 SART3Q15020 963 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 COL23A1Q86Y22 540 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 ESR2Q92731 530 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 HSD3B7Q9H2F3 369 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 TMX1Q9H3N1 280 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 ECM29Q5VYK3 1845 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 UFL1O94874 794 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 ZNF202O95125 648 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 GPS2Q13227 327 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 ZNF804AQ7Z570 1209 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 DZIP1Q86YF9 867 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 WDR66Q8TBY9 1149 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 POLLQ9UGP5 575 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 TNKSO95271 1327 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
SCAMP4-207ENST00000472442 VWA3AA6NCI4 1184 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 BBOX1O75936 387 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 SERPINC1P01008 464 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 GYS2P54840 703 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 UBASH3AP57075 661 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ZSCAN26Q16670 478 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 KCNG4Q8TDN1 519 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 CRNKL1Q9BZJ0 848 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 SPTLC2O15270 562 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 APBA3O96018 575 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 CYP2D6P10635 497 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 CFAP100Q494V2 611 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 SPTY2D1Q68D10 685 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 CPLX2Q6PUV4 134 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 UBAC1Q9BSL1 405 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 CD209Q9NNX6 404 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ERICH2A1L162 156 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 LDHBP07195 334 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 IFNAR1P17181 557 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ATP2B4P23634 1241 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms