RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	PNMA1	Q8ND90	353 aa		12.52	□□□□□ -0.4
MRPS18B-208	ENST00000472267	CTCFL	Q8NI51	663 aa	Predicted RBP	12.52	□□□□□ -0.4
MRPS18B-208	ENST00000472267	AIFM3	Q96NN9	605 aa		12.52	□□□□□ -0.4
MRPS18B-208	ENST00000472267	VEZT	Q9HBM0	779 aa		12.52	□□□□□ -0.4
MRPS18B-208	ENST00000472267	MYH6	P13533	1939 aa		12.52	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MPHOSPH10	O00566	681 aa	Known RBP	12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ENTPD3	O75355	529 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	NPM3	O75607	178 aa	Known RBP	12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	PLEKHA8P1	O95397	391 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SHMT1	P34896	483 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	REST	Q13127	1097 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	RBM26	Q5T8P6	1007 aa	Known RBP	12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ANKS1A	Q92625	1134 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CEP95	Q96GE4	821 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TMEM47	Q9BQJ4	181 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	EHD4	Q9H223	541 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GJB4	Q9NTQ9	266 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	LMBRD1	Q9NUN5	540 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	RBM28	Q9NW13	759 aa	Known RBP	12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	PI4KB	Q9UBF8	816 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SIPA1L1	O43166	1804 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	UBE2Q2L	H0YL09	131 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FIBP	O43427	364 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GMPS	P49915	693 aa	Predicted RBP	12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	AKAP17A	Q02040	695 aa	Known RBP	12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	PPP2R5B	Q15173	497 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SPDYE2	Q495Y8	402 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MYOZ2	Q9NPC6	264 aa		12.51	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ZNF541	Q9H0D2	1346 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	STK36	Q9NRP7	1315 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FZD9	O00144	591 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MYO1B	O43795	1136 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	RPS12	P25398	132 aa	Known RBP	12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GUCY1A2	P33402	732 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TRIM29	Q14134	588 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	NBPF9	Q3BBW0	867 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TPRN	Q4KMQ1	711 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TMTC3	Q6ZXV5	915 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	NBPF11	Q86T75	865 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	USP48	Q86UV5	1035 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MTMR14	Q8NCE2	650 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	WASF1	Q92558	559 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SYT17	Q9BSW7	474 aa		12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.5	□□□□□ -0.41
MRPS18B-208	ENST00000472267	hCG_1642624	A0A1W2PR95	340 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TOP1	P11387	765 aa	Known RBP	12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	KIF5B	P33176	963 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CLEC10A	Q8IUN9	316 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MICALL2	Q8IY33	904 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FBXO18	Q8NFZ0	1043 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CSRNP1	Q96S65	589 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GZF1	Q9H116	711 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	DNAJC18	Q9H819	358 aa		12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TFIP11	Q9UBB9	837 aa	Known RBP	12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	DDX49	Q9Y6V7	483 aa	Known RBP	12.49	□□□□□ -0.41
MRPS18B-208	ENST00000472267	PLIN4	Q96Q06	1357 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	WNT10B	O00744	389 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	DEXI	O95424	95 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	LMNB1	P20700	586 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	KRT85	P78386	507 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ATP2B2	Q01814	1243 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GRM4	Q14833	912 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CERKL	Q49MI3	558 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	KRT40	Q6A162	431 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SRBD1	Q8N5C6	995 aa	Known RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FAM151A	Q8WW52	585 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	PIBF1	Q8WXW3	757 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CCDC17	Q96LX7	622 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MTMR4	Q9NYA4	1195 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CLIP2	Q9UDT6	1046 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CNOT7	Q9UIV1	285 aa	Known RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267		V9GY48	417 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	MYH15	Q9Y2K3	1946 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	CNTNAP1	P78357	1384 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ATRNL1	Q5VV63	1379 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	IGKV6D-41	A0A0C4DH26	115 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ZNF280A	P59817	542 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	FUT2	Q10981	343 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GNL2	Q13823	731 aa	Known RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SAMD7	Q7Z3H4	446 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	LRRC47	Q8N1G4	583 aa	Known RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	STAG2	Q8N3U4	1231 aa		12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	ZBED3	Q96IU2	234 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	RNF26	Q9BY78	433 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SCAF8	Q9UPN6	1271 aa	Known RBP	12.48	□□□□□ -0.41
MRPS18B-208	ENST00000472267	COL2A1	P02458	1487 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	DICER1	Q9UPY3	1922 aa	Known RBP	12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	SBF1	O95248	1867 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	PRPF3	O43395	683 aa	Known RBP	12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GADD45B	O75293	160 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GDF11	O95390	407 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	TTLL1	O95922	423 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	EGFR	P00533	1210 aa		12.47	□□□□□ -0.41
MRPS18B-208	ENST00000472267	GOLGA8H	P0CJ92	632 aa		12.47	□□□□□ -0.41

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