RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 PTPREP23469 700 aa24.26■■□□□ 1.47
CCDC78-208ENST00000471861 G3BP1Q13283 466 aaKnown RBP eCLIP24.26■■□□□ 1.47
CCDC78-208ENST00000471861 GRB14Q14449 540 aa24.26■■□□□ 1.47
CCDC78-208ENST00000471861 MFSD14CQ5VZR4 134 aa24.26■■□□□ 1.47
CCDC78-208ENST00000471861 LPAR1Q92633 364 aa24.26■■□□□ 1.47
CCDC78-208ENST00000471861 SLC15A5A6NIM6 579 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L15C9J2P7 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L13C9JLJ4 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L11C9JVI0 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L18D6R9N7 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L22D6RA61 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L17D6RBQ6 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L19D6RCP7 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L20D6RJB6 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 HOXC6P09630 235 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 VCAM1P19320 739 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 CYP2C19P33261 490 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 USP17L24Q0WX57 530 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 TNNI3KQ59H18 835 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 TTC39AQ5SRH9 613 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 TATDN1Q6P1N9 297 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 CATSPERGQ6ZRH7 1159 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 LBHD1Q9BQE6 289 aaPredicted RBP24.25■■□□□ 1.47
CCDC78-208ENST00000471861 CWC22Q9HCG8 908 aaKnown RBP24.25■■□□□ 1.47
CCDC78-208ENST00000471861 FPGT-TNNI3KV9GXZ4 949 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 PRUNE2Q8WUY3 3088 aa24.25■■□□□ 1.47
CCDC78-208ENST00000471861 DNM1LO00429 736 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 GNAI2P04899 355 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 ZAP70P43403 619 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 RTP1P59025 263 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 CCNA1P78396 465 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 WDR78Q5VTH9 848 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 LBX2Q6XYB7 198 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 ACER1Q8TDN7 264 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 FEZ1Q99689 392 aa24.24■■□□□ 1.47
CCDC78-208ENST00000471861 MYH1P12882 1939 aa24.23■■□□□ 1.47
CCDC78-208ENST00000471861 RLFQ13129 1914 aa24.23■■□□□ 1.47
CCDC78-208ENST00000471861 SPDYE16A6NNV3 312 aaPredicted RBP24.23■■□□□ 1.47
CCDC78-208ENST00000471861 CYBAP13498 195 aa24.23■■□□□ 1.47
CCDC78-208ENST00000471861 TRIM27P14373 513 aa24.23■■□□□ 1.47
CCDC78-208ENST00000471861 GPR108Q9NPR9 543 aa24.23■■□□□ 1.47
CCDC78-208ENST00000471861 ZNF236Q9UL36 1845 aa24.22■■□□□ 1.47
CCDC78-208ENST00000471861 MSCO60682 206 aa24.22■■□□□ 1.47
CCDC78-208ENST00000471861 CNGA1P29973 690 aa24.22■■□□□ 1.47
CCDC78-208ENST00000471861 ZNF697Q5TEC3 545 aa24.22■■□□□ 1.47
CCDC78-208ENST00000471861 KIAA1683Q9H0B3 1180 aa24.22■■□□□ 1.47
CCDC78-208ENST00000471861 GLRX3O76003 335 aaKnown RBP24.21■■□□□ 1.47
CCDC78-208ENST00000471861 ATP2B2Q01814 1243 aa24.21■■□□□ 1.47
CCDC78-208ENST00000471861 C9orf50Q5SZB4 431 aa24.21■■□□□ 1.47
CCDC78-208ENST00000471861 ATF7IPQ6VMQ6 1270 aa24.21■■□□□ 1.47
CCDC78-208ENST00000471861 MIGA1Q8NAN2 632 aa24.21■■□□□ 1.47
CCDC78-208ENST00000471861 ZNF512BQ96KM6 892 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-208ENST00000471861 CDX2Q99626 313 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-208ENST00000471861 CYP7A1P22680 504 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 POLA2Q14181 598 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 RAB3GAP1Q15042 981 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 SHHQ15465 462 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 CCDC158Q5M9N0 1113 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 GJC2Q5T442 439 aaPredicted RBP24.2■■□□□ 1.46
CCDC78-208ENST00000471861 EHD4Q9H223 541 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 TLR7Q9NYK1 1049 aaKnown RBP24.2■■□□□ 1.46
CCDC78-208ENST00000471861 ATP11BQ9Y2G3 1177 aa24.2■■□□□ 1.46
CCDC78-208ENST00000471861 A0A0G2JMZ2 1700 aa24.19■■□□□ 1.46
CCDC78-208ENST00000471861 GUCY1A2P33402 732 aa24.19■■□□□ 1.46
CCDC78-208ENST00000471861 USP14P54578 494 aa24.19■■□□□ 1.46
CCDC78-208ENST00000471861 RPAP3Q9H6T3 665 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-208ENST00000471861 SERPINB13Q9UIV8 391 aa24.19■■□□□ 1.46
CCDC78-208ENST00000471861 DBNLQ9UJU6 430 aaKnown RBP24.19■■□□□ 1.46
CCDC78-208ENST00000471861 IVNS1ABPQ9Y6Y0 642 aa24.19■■□□□ 1.46
CCDC78-208ENST00000471861 SHMT1P34896 483 aa24.18■■□□□ 1.46
CCDC78-208ENST00000471861 ANO1Q5XXA6 986 aa24.18■■□□□ 1.46
CCDC78-208ENST00000471861 PRKAG2Q9UGJ0 569 aa24.18■■□□□ 1.46
CCDC78-208ENST00000471861 IGSF3O75054 1194 aa24.17■■□□□ 1.46
CCDC78-208ENST00000471861 SNX17Q15036 470 aa24.17■■□□□ 1.46
CCDC78-208ENST00000471861 ABCB5Q2M3G0 1257 aa24.17■■□□□ 1.46
CCDC78-208ENST00000471861 CERKLQ49MI3 558 aaPredicted RBP24.17■■□□□ 1.46
CCDC78-208ENST00000471861 SLC39A5Q6ZMH5 540 aa24.17■■□□□ 1.46
CCDC78-208ENST00000471861 TTYH1Q9H313 450 aaPredicted RBP24.17■■□□□ 1.46
CCDC78-208ENST00000471861 ADORA2AP29274 412 aa24.16■■□□□ 1.46
CCDC78-208ENST00000471861 USP5P45974 858 aa24.16■■□□□ 1.46
CCDC78-208ENST00000471861 TRIM60Q495X7 471 aa24.16■■□□□ 1.46
CCDC78-208ENST00000471861 MAFAQ8NHW3 353 aaPredicted RBP24.16■■□□□ 1.46
CCDC78-208ENST00000471861 SSH3Q8TE77 659 aa24.16■■□□□ 1.46
CCDC78-208ENST00000471861 MOV10L1Q9BXT6 1211 aaKnown RBP24.16■■□□□ 1.46
CCDC78-208ENST00000471861 SEMA6BQ9H3T3 888 aa24.16■■□□□ 1.46
CCDC78-208ENST00000471861 PDLIM7Q9NR12 457 aa24.16■■□□□ 1.46
CCDC78-208ENST00000471861 IDH1O75874 414 aaKnown RBP24.15■■□□□ 1.46
CCDC78-208ENST00000471861 PLCD1P51178 756 aa24.15■■□□□ 1.46
CCDC78-208ENST00000471861 EVX2Q03828 476 aa24.15■■□□□ 1.46
CCDC78-208ENST00000471861 OLFML2BQ68BL8 750 aa24.15■■□□□ 1.46
CCDC78-208ENST00000471861 BADQ92934 168 aa24.15■■□□□ 1.46
CCDC78-208ENST00000471861 CLUAP1Q96AJ1 413 aa24.15■■□□□ 1.46
CCDC78-208ENST00000471861 PRDM5Q9NQX1 630 aaPredicted RBP24.15■■□□□ 1.46
CCDC78-208ENST00000471861 A0A1W2PRG0 241 aa24.14■■□□□ 1.45
CCDC78-208ENST00000471861 COBLO75128 1261 aa24.14■■□□□ 1.45
CCDC78-208ENST00000471861 SH3RF1Q7Z6J0 888 aa24.14■■□□□ 1.45
CCDC78-208ENST00000471861 MAGEB6Q8N7X4 407 aa24.14■■□□□ 1.45
CCDC78-208ENST00000471861 MYLIPQ8WY64 445 aa24.14■■□□□ 1.45
CCDC78-208ENST00000471861 ANTXR1Q9H6X2 564 aa24.14■■□□□ 1.45
CCDC78-208ENST00000471861 TRIM43BA6NCK2 446 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms