RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 PEX10O60683 326 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 CYP2D6P10635 497 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 UBE3CQ15386 1083 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 CERKLQ49MI3 558 aaPredicted RBP22.73■■□□□ 1.23
COMMD1-207ENST00000471704 GPRC5AQ8NFJ5 357 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 OTUD7AQ8TE49 926 aaPredicted RBP22.73■■□□□ 1.23
COMMD1-207ENST00000471704 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.73■■□□□ 1.23
COMMD1-207ENST00000471704 CRISPLD2Q9H0B8 497 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 MCM9Q9NXL9 1143 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 PCDH10Q9P2E7 1040 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 TAOK2Q9UL54 1235 aa22.73■■□□□ 1.23
COMMD1-207ENST00000471704 SMIM22K7EJ46 135 aa22.72■■□□□ 1.23
COMMD1-207ENST00000471704 ABCB5Q2M3G0 1257 aa22.72■■□□□ 1.23
COMMD1-207ENST00000471704 DEFB118Q96PH6 123 aa22.72■■□□□ 1.23
COMMD1-207ENST00000471704 KIAA1683Q9H0B3 1180 aa22.72■■□□□ 1.23
COMMD1-207ENST00000471704 PUS7LQ9H0K6 701 aaKnown RBP22.72■■□□□ 1.23
COMMD1-207ENST00000471704 TRIOBPQ9H2D6 2365 aa22.71■■□□□ 1.23
COMMD1-207ENST00000471704 RANBP2P49792 3224 aaKnown RBP22.71■■□□□ 1.23
COMMD1-207ENST00000471704 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-207ENST00000471704 HMGCRP04035 888 aa22.71■■□□□ 1.23
COMMD1-207ENST00000471704 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-207ENST00000471704 GUCY1A2P33402 732 aa22.71■■□□□ 1.23
COMMD1-207ENST00000471704 Q3C1V9 767 aa22.71■■□□□ 1.23
COMMD1-207ENST00000471704 GTF3C2Q8WUA4 911 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-207ENST00000471704 COLQQ9Y215 455 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-207ENST00000471704 ERVK-9P63128 1117 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 ERVK-24P63145 666 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 RAB3GAP1Q15042 981 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 PI4K2BQ8TCG2 481 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 ACER1Q8TDN7 264 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 DPF3Q92784 378 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 HTATIP2Q9BUP3 242 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 SALL3Q9BXA9 1300 aa22.7■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L15C9J2P7 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L13C9JLJ4 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L11C9JVI0 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L18D6R9N7 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L22D6RA61 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L17D6RBQ6 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L19D6RCP7 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L20D6RJB6 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
COMMD1-207ENST00000471704 XRCC5P13010 732 aaKnown RBP22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP14P54578 494 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP17L24Q0WX57 530 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 KBTBD3Q8NAB2 608 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 SLC44A5Q8NCS7 719 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 USP6NLQ92738 828 aa22.69■■□□□ 1.22
COMMD1-207ENST00000471704 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.69■■□□□ 1.22
COMMD1-207ENST00000471704 CYP2D7A0A087X1C5 515 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 MAPK4P31152 587 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 TRIM32Q13049 653 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 CATSPERGQ6ZRH7 1159 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 FEZ1Q99689 392 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 PORCNQ9H237 461 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 CABP5Q9NP86 173 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 ATP8A2Q9NTI2 1148 aa22.68■■□□□ 1.22
COMMD1-207ENST00000471704 GREB1LQ9C091 1923 aaPredicted RBP22.68■■□□□ 1.22
COMMD1-207ENST00000471704 TTC41PQ6P2S7 1318 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 RPTORQ8N122 1335 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 CNMDO75829 334 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 ZYXQ15942 572 aaKnown RBP22.67■■□□□ 1.22
COMMD1-207ENST00000471704 MAP3K21Q5TCX8 1036 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 ZSCAN25Q6NSZ9 544 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 SOCS4Q8WXH5 440 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 TRIB2Q92519 343 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 DYNLL2Q96FJ2 89 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 NUDT12Q9BQG2 462 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 RABGAP1Q9Y3P9 1069 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 RLFQ13129 1914 aa22.67■■□□□ 1.22
COMMD1-207ENST00000471704 PARP14Q460N5 1801 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 VCAM1P19320 739 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 CYP2B6P20813 491 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 SEPT2Q15019 361 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 MORN1Q5T089 497 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 LBX2Q6XYB7 198 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 OSBP2Q969R2 916 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 PAGR1Q9BTK6 254 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 SLC4A4Q9Y6R1 1079 aa22.66■■□□□ 1.22
COMMD1-207ENST00000471704 FXR1P51114 621 aaKnown RBP eCLIP22.65■■□□□ 1.22
COMMD1-207ENST00000471704 HDAC1Q13547 482 aaPredicted RBP22.65■■□□□ 1.22
COMMD1-207ENST00000471704 C12orf60Q5U649 245 aa22.65■■□□□ 1.22
COMMD1-207ENST00000471704 GPR142Q7Z601 462 aa22.65■■□□□ 1.22
COMMD1-207ENST00000471704 STRBPQ96SI9 672 aaKnown RBP22.65■■□□□ 1.22
COMMD1-207ENST00000471704 HMX1Q9NP08 348 aaPredicted RBP22.65■■□□□ 1.22
COMMD1-207ENST00000471704 A0A1W2PRG0 241 aa22.64■■□□□ 1.21
COMMD1-207ENST00000471704 USP17L12C9JPN9 530 aa22.64■■□□□ 1.21
COMMD1-207ENST00000471704 USP17L21D6R901 530 aa22.64■■□□□ 1.21
COMMD1-207ENST00000471704 PLEKHH3Q7Z736 793 aa22.64■■□□□ 1.21
COMMD1-207ENST00000471704 ANKLE1Q8NAG6 615 aa22.64■■□□□ 1.21
COMMD1-207ENST00000471704 ALPK3Q96L96 1907 aa22.64■■□□□ 1.21
COMMD1-207ENST00000471704 A0A0G2JMZ2 1700 aa22.63■■□□□ 1.21
COMMD1-207ENST00000471704 RNF113AO15541 343 aaKnown RBP22.63■■□□□ 1.21
COMMD1-207ENST00000471704 CTR9Q6PD62 1173 aa22.63■■□□□ 1.21
COMMD1-207ENST00000471704 TRMT44Q8IYL2 757 aaKnown RBP22.63■■□□□ 1.21
COMMD1-207ENST00000471704 APPBP2Q92624 585 aa22.63■■□□□ 1.21
COMMD1-207ENST00000471704 PAWRQ96IZ0 340 aaKnown RBP22.63■■□□□ 1.21
COMMD1-207ENST00000471704 SWAP70Q9UH65 585 aa22.63■■□□□ 1.21
COMMD1-207ENST00000471704 NR2E3Q9Y5X4 410 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms