RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
COL20A1-205ENST00000471582 FBXO2Q9UK22 296 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-205ENST00000471582 ATP2B4P23634 1241 aa21.38■■□□□ 1.01
COL20A1-205ENST00000471582 PPP4CP60510 307 aa21.38■■□□□ 1.01
COL20A1-205ENST00000471582 CTCFLQ8NI51 663 aaPredicted RBP21.38■■□□□ 1.01
COL20A1-205ENST00000471582 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 BAG3O95817 575 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 KRT2P35908 639 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 C12orf60Q5U649 245 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 KRBA2Q6ZNG9 492 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 OXER1Q8TDS5 423 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 MCM9Q9NXL9 1143 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 FAM13BQ9NYF5 915 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 HOOK1Q9UJC3 728 aaKnown RBP21.37■■□□□ 1.01
COL20A1-205ENST00000471582 CNTNAP5Q8WYK1 1306 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 SMTNL1A8MU46 457 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 IKBKBO14920 756 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 NEMFO60524 1076 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 MMP10P09238 476 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 CYP2D6P10635 497 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 TPM4P67936 248 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 SHISA4Q96DD7 197 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 NRBP1Q9UHY1 535 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 SRPRBQ9Y5M8 271 aaKnown RBP21.37■■□□□ 1.01
COL20A1-205ENST00000471582 PARP3Q9Y6F1 533 aa21.37■■□□□ 1.01
COL20A1-205ENST00000471582 V9GY48 417 aaPredicted RBP21.37■■□□□ 1.01
COL20A1-205ENST00000471582 TSPY2A6NKD2 308 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 LDHCP07864 332 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 GPSM2P81274 684 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 DEFB132Q7Z7B7 95 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 BRMS1Q9HCU9 246 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 VPS54Q9P1Q0 977 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 GGA1Q9UJY5 639 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 JAG2Q9Y219 1238 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 PCDHB6Q9Y5E3 794 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 ANKRD31Q8N7Z5 1873 aa21.36■■□□□ 1.01
COL20A1-205ENST00000471582 UFL1O94874 794 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 BMP15O95972 392 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 USP5P45974 858 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 EVX2Q03828 476 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 CCDC178Q5BJE1 867 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 DNTTIP2Q5QJE6 756 aaKnown RBP21.35■■□□□ 1.01
COL20A1-205ENST00000471582 NAV1Q8NEY1 1877 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 KIF5BP33176 963 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 FAM47AQ5JRC9 791 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 METTL16Q86W50 562 aaKnown RBP21.35■■□□□ 1.01
COL20A1-205ENST00000471582 DGKHQ86XP1 1220 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 AMOTL1Q8IY63 956 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 C17orf53Q8N3J3 647 aaPredicted RBP21.35■■□□□ 1.01
COL20A1-205ENST00000471582 CNNM3Q8NE01 707 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 ANKS1AQ92625 1134 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 PRIMPOLQ96LW4 560 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 CABP5Q9NP86 173 aa21.35■■□□□ 1.01
COL20A1-205ENST00000471582 TRIM75PA6NK02 468 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 BIN1O00499 593 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 USP17L8P0C7I0 530 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 IL1R1P14778 569 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 LONRF3Q496Y0 759 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 RCSD1Q6JBY9 416 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 FBXW7Q969H0 707 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 PODXL2Q9NZ53 605 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 LRRC37AA6NMS7 1700 aa21.34■■□□□ 1.01
COL20A1-205ENST00000471582 NMT2O60551 498 aa21.33■■□□□ 1.01
COL20A1-205ENST00000471582 NCAPHQ15003 741 aa21.33■■□□□ 1.01
COL20A1-205ENST00000471582 CCDC144BQ3MJ40 725 aa21.33■■□□□ 1.01
COL20A1-205ENST00000471582 SRBD1Q8N5C6 995 aaKnown RBP21.33■■□□□ 1.01
COL20A1-205ENST00000471582 SH3RF3Q8TEJ3 882 aaPredicted RBP21.33■■□□□ 1.01
COL20A1-205ENST00000471582 TNFRSF25Q93038 417 aa21.33■■□□□ 1.01
COL20A1-205ENST00000471582 PNOCQ13519 176 aa21.33■■□□□ 1
COL20A1-205ENST00000471582 PPEF1O14829 653 aaPredicted RBP21.32■■□□□ 1
COL20A1-205ENST00000471582 MYO1BO43795 1136 aa21.32■■□□□ 1
COL20A1-205ENST00000471582 PDE6BP35913 854 aa21.32■■□□□ 1
COL20A1-205ENST00000471582 MDM2Q00987 491 aaPredicted RBP21.32■■□□□ 1
COL20A1-205ENST00000471582 NPY5RQ15761 445 aa21.32■■□□□ 1
COL20A1-205ENST00000471582 MSL1Q68DK7 614 aa21.32■■□□□ 1
COL20A1-205ENST00000471582 CACTINQ8WUQ7 758 aaKnown RBP21.32■■□□□ 1
COL20A1-205ENST00000471582 CD209Q9NNX6 404 aa21.32■■□□□ 1
COL20A1-205ENST00000471582 IMPACTQ9P2X3 320 aa21.32■■□□□ 1
COL20A1-205ENST00000471582 SCG2P13521 617 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 LRMPQ12912 555 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 KANK3Q6NY19 840 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 SLC51AQ86UW1 340 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 RTFDC1Q9BY42 306 aaPredicted RBP21.31■■□□□ 1
COL20A1-205ENST00000471582 TCP11L1Q9NUJ3 509 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 NPR1P16066 1061 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 GSDMDP57764 484 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 TFAP4Q01664 338 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 PFKFB3Q16875 520 aaPredicted RBP21.31■■□□□ 1
COL20A1-205ENST00000471582 NT5DC1Q5TFE4 455 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 CCDC125Q86Z20 511 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 LRRC8AQ8IWT6 810 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 SP8Q8IXZ3 490 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 FERMT2Q96AC1 680 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 KAT14Q9H8E8 782 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 LTBP1Q14766 1721 aa21.31■■□□□ 1
COL20A1-205ENST00000471582 GRIN1Q05586 938 aa21.3■■□□□ 1
COL20A1-205ENST00000471582 DHX8Q14562 1220 aaKnown RBP21.3■■□□□ 1
COL20A1-205ENST00000471582 DDX60LQ5H9U9 1706 aaKnown RBP21.3■■□□□ 1
COL20A1-205ENST00000471582 UQCRHLA0A096LP55 91 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms