RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 LRRC45Q96CN5 670 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 ARMT1Q9H993 441 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 ERBB3P21860 1342 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 H7C1D1 291 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
RRP1B-202ENST00000470886 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 SPATS2Q86XZ4 545 aaKnown RBP11.79□□□□□ -0.52
RRP1B-202ENST00000470886 PHKBQ93100 1093 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 BPIFA3Q9BQP9 254 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
RRP1B-202ENST00000470886 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
RRP1B-202ENST00000470886 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 SYCP3Q8IZU3 236 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 MTRF1LQ9UGC7 380 aaKnown RBP11.78□□□□□ -0.52
RRP1B-202ENST00000470886 KCNQ3O43525 872 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 GALNT17Q6IS24 598 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 HOOK3Q86VS8 718 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 C10orf67Q8IYJ2 551 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
RRP1B-202ENST00000470886 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
RRP1B-202ENST00000470886 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.529e-12■■■■■ 149.1
RRP1B-202ENST00000470886 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 GOLGA6BA6NDN3 693 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 PHACTR2O75167 634 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 FGAP02671 866 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 NF2P35240 595 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 ARHGAP25P42331 645 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 PAK2Q13177 524 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 RUFY4Q6ZNE9 571 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 NELFBQ8WX92 580 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 TSC1Q92574 1164 aa11.78□□□□□ -0.52
RRP1B-202ENST00000470886 PARP1P09874 1014 aaKnown RBP11.77□□□□□ -0.52
RRP1B-202ENST00000470886 DNM2P50570 870 aa11.77□□□□□ -0.52
RRP1B-202ENST00000470886 SLC9C1Q4G0N8 1177 aa11.77□□□□□ -0.52
RRP1B-202ENST00000470886 PPP4R3AQ6IN85 833 aa11.77□□□□□ -0.52
RRP1B-202ENST00000470886 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.52
RRP1B-202ENST00000470886 TRIM58Q8NG06 486 aa11.77□□□□□ -0.52
RRP1B-202ENST00000470886 KCNB2Q92953 911 aa11.77□□□□□ -0.52
RRP1B-202ENST00000470886 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
RRP1B-202ENST00000470886 NT5C2P49902 561 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 ZSCAN26Q16670 478 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 PIK3AP1Q6ZUJ8 805 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 FAM71BQ8TC56 605 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 SWAP70Q9UH65 585 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 CDC23Q9UJX2 597 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 TRAPPC10P48553 1259 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 MRPL12P52815 198 aaKnown RBP11.77□□□□□ -0.53
RRP1B-202ENST00000470886 GOLGA5Q8TBA6 731 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 ZKSCAN3Q9BRR0 538 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 FANCLQ9NW38 375 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 NRBP1Q9UHY1 535 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
RRP1B-202ENST00000470886 CEP128Q6ZU80 1094 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
RRP1B-202ENST00000470886 HS2ST1Q7LGA3 356 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 SRGAP1Q7Z6B7 1085 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
RRP1B-202ENST00000470886 ORAI2Q96SN7 254 aa11.77□□□□□ -0.53
RRP1B-202ENST00000470886 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
RRP1B-202ENST00000470886 CLIC4Q9Y696 253 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 MACROD2A1Z1Q3 448 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 ANKRD62A6NC57 917 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 KIF4AO95239 1232 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 APBA1Q02410 837 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
RRP1B-202ENST00000470886 CFAP221Q4G0U5 840 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 CCDC50Q8IVM0 306 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
RRP1B-202ENST00000470886 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
RRP1B-202ENST00000470886 LARGE1O95461 756 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 KIF23Q02241 960 aaPredicted RBP11.76□□□□□ -0.53
RRP1B-202ENST00000470886 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 TOPAZ1Q8N9V7 1692 aa11.76□□□□□ -0.53
RRP1B-202ENST00000470886 CCDC151A5D8V7 595 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 GNA14O95837 355 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 MAGEA1P43355 309 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 ZNF589Q86UQ0 364 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 DDAH1O94760 285 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 A1BGP04217 495 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 PDE6AP16499 860 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 ADKP55263 362 aaKnown RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 CCDC174Q6PII3 467 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms