RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 GDF11O95390 407 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 VEGFAP15692 232 aaPredicted RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 PDCP20941 246 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 HMGN5P82970 282 aaKnown RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 AKAP17AQ02040 695 aaKnown RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 SRCAPQ6ZRS2 3230 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 USP48Q86UV5 1035 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 CEP95Q96GE4 821 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 GINM1Q9NU53 330 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 MTMR4Q9NYA4 1195 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 PLIN4Q96Q06 1357 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 BAZ2AQ9UIF9 1905 aaKnown RBP11.39□□□□□ -0.59
CCM2-204ENST00000470837 LAMB1P07942 1786 aa11.39□□□□□ -0.59
CCM2-204ENST00000470837 RAD21O60216 631 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 PPP1R12BO60237 982 aaPredicted RBP11.38□□□□□ -0.59
CCM2-204ENST00000470837 LARGE1O95461 756 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 GH2P01242 217 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 ASNSP08243 561 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 GNAQP50148 359 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 ICA1Q05084 483 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 SCRN1Q12765 414 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 RAB11FIP4Q86YS3 637 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 CCDC144CPQ8IYA2 1237 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 FANCBQ8NB91 859 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 ANKS1AQ92625 1134 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
CCM2-204ENST00000470837 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 PICK1Q9NRD5 415 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 IL17RBQ9NRM6 502 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 CHMP5Q9NZZ3 219 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 CLIP2Q9UDT6 1046 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 ISY1Q9ULR0 285 aaKnown RBP11.38□□□□□ -0.59
CCM2-204ENST00000470837 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
CCM2-204ENST00000470837 MTMR7Q9Y216 660 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 SBF1O95248 1867 aa11.38□□□□□ -0.59
CCM2-204ENST00000470837 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
CCM2-204ENST00000470837 RXRAP19793 462 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 GJB2P29033 226 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 CAP2P40123 477 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 NUCB2P80303 420 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 NBPF12Q5TAG4 269 aaPredicted RBP11.37□□□□□ -0.59
CCM2-204ENST00000470837 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 WASF1Q92558 559 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 MAP3K14Q99558 947 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 TMEM47Q9BQJ4 181 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
CCM2-204ENST00000470837 DDX60LQ5H9U9 1706 aaKnown RBP11.36□□□□□ -0.59
CCM2-204ENST00000470837 PTPDC1A2A3K4 754 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
CCM2-204ENST00000470837 IREB2P48200 963 aaKnown RBP11.36□□□□□ -0.59
CCM2-204ENST00000470837 MAP3K10Q02779 954 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 SSRP1Q08945 709 aaKnown RBP11.36□□□□□ -0.59
CCM2-204ENST00000470837 TTLL12Q14166 644 aaPredicted RBP11.36□□□□□ -0.59
CCM2-204ENST00000470837 SEPT2Q15019 361 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 FEZ1Q99689 392 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 LZTS2Q9BRK4 669 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 RRAGCQ9HB90 399 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 NYAP2Q9P242 653 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 ZBTB21Q9ULJ3 1066 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 SYNPO2Q9UMS6 1093 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 HPS5Q9UPZ3 1129 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 MYH1P12882 1939 aa11.36□□□□□ -0.59
CCM2-204ENST00000470837 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 IGKV6D-41A0A0C4DH26 115 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 H3BQV1 296 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 EEF2P13639 858 aaKnown RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 TROAPQ12815 778 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 TRIM29Q14134 588 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 LARP1BQ659C4 914 aaKnown RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 RCSD1Q6JBY9 416 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 CDAN1Q8IWY9 1227 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 LRRC47Q8N1G4 583 aaKnown RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 ZNF526Q8TF50 670 aaPredicted RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 DDX11Q96FC9 970 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCM2-204ENST00000470837 AS3MTQ9HBK9 375 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 ORC3Q9UBD5 711 aaPredicted RBP11.35□□□□□ -0.59
CCM2-204ENST00000470837 PGAP2Q9UHJ9 254 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 ECM29Q5VYK3 1845 aa11.35□□□□□ -0.59
CCM2-204ENST00000470837 SLURP2P0DP57 97 aa11.34□□□□□ -0.59
CCM2-204ENST00000470837 XBP1P17861 261 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms