RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 WDR78Q5VTH9 848 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 CABP5Q9NP86 173 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 SERPINB13Q9UIV8 391 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
SEMA3F-208ENST00000470737 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 MORN1Q5T089 497 aa16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 C12orf42Q96LP6 360 aa16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 EHD4Q9H223 541 aa16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 IVNS1ABPQ9Y6Y0 642 aa16.88■□□□□ 0.29
SEMA3F-208ENST00000470737 MAGEA10P43363 369 aaPredicted RBP16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 MAP2K5Q13163 448 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 CCL14Q16627 93 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 MFSD14CQ5VZR4 134 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 TATDN1Q6P1N9 297 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 USP6NLQ92738 828 aa16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
SEMA3F-208ENST00000470737 CCND3P30281 292 aaPredicted RBP16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 GPR153Q6NV75 609 aa16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 TDHQ8IZJ6 230 aa16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 EDC3Q96F86 508 aaKnown RBP16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 UBE2OQ9C0C9 1292 aaKnown RBP16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 KIAA1683Q9H0B3 1180 aa16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 PFASO15067 1338 aa16.86■□□□□ 0.29
SEMA3F-208ENST00000470737 FRMPD3Q5JV73 1810 aa16.85■□□□□ 0.29
SEMA3F-208ENST00000470737 NAV1Q8NEY1 1877 aa16.85■□□□□ 0.29
SEMA3F-208ENST00000470737 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
SEMA3F-208ENST00000470737 CATSPERGQ6ZRH7 1159 aa16.85■□□□□ 0.29
SEMA3F-208ENST00000470737 AACSQ86V21 672 aa16.85■□□□□ 0.29
SEMA3F-208ENST00000470737 LAMA3Q16787 3333 aa16.85■□□□□ 0.29
SEMA3F-208ENST00000470737 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 COL6A1P12109 1028 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 VCAM1P19320 739 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 ATP2B2Q01814 1243 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 TTF1Q15361 905 aaPredicted RBP16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 LRIT3Q3SXY7 679 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 DEFB123Q8N688 67 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
SEMA3F-208ENST00000470737 MAGEB6P1A0A0J9YX57 407 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 MSCO60682 206 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 CNMDO75829 334 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 PTPREP23469 700 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 CNGA1P29973 690 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 LHX8Q68G74 356 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 CRNKL1Q9BZJ0 848 aaKnown RBP16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 ANTXR1Q9H6X2 564 aa16.83■□□□□ 0.28
SEMA3F-208ENST00000470737 DLL1O00548 723 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 MPHOSPH10O00566 681 aaKnown RBP16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 LRRC26Q2I0M4 334 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 CEP85Q6P2H3 762 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 POTEEQ6S8J3 1075 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 LBX2Q6XYB7 198 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 ACER1Q8TDN7 264 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 MYH8P13535 1937 aa16.82■□□□□ 0.28
SEMA3F-208ENST00000470737 SHMT1P34896 483 aa16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 PLCD1P51178 756 aa16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 GRB14Q14449 540 aa16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 BTBD7Q9P203 1132 aa16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
SEMA3F-208ENST00000470737 SPDYE16A6NNV3 312 aaPredicted RBP16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 HOXC6P09630 235 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 RLBP1P12271 317 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 MDM2Q00987 491 aaPredicted RBP16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 SEPT2Q15019 361 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 SLC9C2Q5TAH2 1124 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 DPP9Q86TI2 863 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 LPAR1Q92633 364 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 RIOK1Q9BRS2 568 aaKnown RBP16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 MCM9Q9NXL9 1143 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 HOXC10Q9NYD6 342 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 PRKAG2Q9UGJ0 569 aa16.8■□□□□ 0.28
SEMA3F-208ENST00000470737 COG2Q14746 738 aa16.79■□□□□ 0.28
SEMA3F-208ENST00000470737 Q7L0L9 218 aa16.79■□□□□ 0.28
SEMA3F-208ENST00000470737 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
SEMA3F-208ENST00000470737 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
SEMA3F-208ENST00000470737 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
SEMA3F-208ENST00000470737 FLRT1Q9NZU1 646 aa16.79■□□□□ 0.28
SEMA3F-208ENST00000470737 ZBED9Q6R2W3 1325 aa16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 STRNO43815 780 aa16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 PDE6AP16499 860 aa16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 CYP2C19P33261 490 aa16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 NPLOC4Q8TAT6 608 aa16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
SEMA3F-208ENST00000470737 COL6A3P12111 3177 aa16.77■□□□□ 0.28
SEMA3F-208ENST00000470737 ZNF532Q9HCE3 1301 aa16.77■□□□□ 0.28
SEMA3F-208ENST00000470737 DNM1LO00429 736 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms