RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 COX4I2Q96KJ9 171 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 DPH2Q9BQC3 489 aaPredicted RBP6.82□□□□□ -1.32
COL9A1-206ENST00000470652 REV1Q9UBZ9 1251 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 TMEM265A0A087WTH1 108 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 GNAT3A8MTJ3 354 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 ZNF394Q53GI3 561 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 SFRP5Q5T4F7 317 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 SLFN12Q8IYM2 578 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 BRMS1Q9HCU9 246 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 VAV3Q9UKW4 847 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 SLC5A6Q9Y289 635 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 BICRAQ9NZM4 1560 aa6.81□□□□□ -1.32
COL9A1-206ENST00000470652 UPK3BL1B0FP48 263 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 UPK3BL2E5RIL1 263 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 ATE1O95260 518 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 ITIH2P19823 946 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 CRKP46108 304 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 PRKCQQ04759 706 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 ZNF648Q5T619 568 aaPredicted RBP6.8□□□□□ -1.32
COL9A1-206ENST00000470652 C22orf34Q6ZV56 151 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 REXO1Q8N1G1 1221 aaKnown RBP6.8□□□□□ -1.32
COL9A1-206ENST00000470652 CYB5D2Q8WUJ1 264 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
COL9A1-206ENST00000470652 NKD1Q969G9 470 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 TNKS2Q9H2K2 1166 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 PODXL2Q9NZ53 605 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
COL9A1-206ENST00000470652 PLAGL2Q9UPG8 496 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 CEP131Q9UPN4 1083 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 PCDHB14Q9Y5E9 798 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 PCDHGB7Q9Y5F8 929 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 U3KQE9 123 aa6.8□□□□□ -1.32
COL9A1-206ENST00000470652 ZNF865P0CJ78 1059 aaPredicted RBP6.79□□□□□ -1.32
COL9A1-206ENST00000470652 ETV3P41162 512 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 ZNF165P49910 485 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 RACK1P63244 317 aaKnown RBP6.79□□□□□ -1.32
COL9A1-206ENST00000470652 PLCL1Q15111 1095 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 CDH24Q86UP0 819 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 METTL16Q86W50 562 aaKnown RBP6.79□□□□□ -1.32
COL9A1-206ENST00000470652 SLITRK4Q8IW52 837 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 ZNF654Q8IZM8 581 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 EAF1Q96JC9 268 aaPredicted RBP6.79□□□□□ -1.32
COL9A1-206ENST00000470652 HRASLS5Q96KN8 279 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 EHMT1Q9H9B1 1298 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 KLHL3Q9UH77 587 aa6.79□□□□□ -1.32
COL9A1-206ENST00000470652 CHURC1-FNTBB4DL54 471 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 BIN1O00499 593 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 PAPLNO95428 1278 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 MCM4P33991 863 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 KIR3DL1P43629 444 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 ZNF124Q15973 351 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 AOC3Q16853 763 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 NKPD1Q17RQ9 610 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 SPACA3Q8IXA5 215 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
COL9A1-206ENST00000470652 CNTNAP4Q9C0A0 1308 aa6.77□□□□□ -1.32
COL9A1-206ENST00000470652 SLC22A31A6NKX4 558 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 FAM155AB1AL88 458 aaPredicted RBP6.77□□□□□ -1.33
COL9A1-206ENST00000470652 CLCN7P51798 805 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 HDLBPQ00341 1268 aaKnown RBP6.77□□□□□ -1.33
COL9A1-206ENST00000470652 ZNF574Q6ZN55 896 aaPredicted RBP6.77□□□□□ -1.33
COL9A1-206ENST00000470652 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 NT5DC4Q86YG4 428 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 MFSD4AQ8N468 514 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 DNAJB8Q8NHS0 232 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 ASB11Q8WXH4 323 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 GMIPQ9P107 970 aa6.77□□□□□ -1.33
COL9A1-206ENST00000470652 DNAJA2O60884 412 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 CBX7O95931 251 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 CLCQ05315 142 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 BNIP3Q12983 259 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
COL9A1-206ENST00000470652 ZNF792Q3KQV3 632 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 SPRED2Q7Z698 418 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 PHACTR4Q8IZ21 702 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 PPP1R13LQ8WUF5 828 aa6.76□□□□□ -1.33
COL9A1-206ENST00000470652 PRR33A8MZF0 331 aa6.75□□□□□ -1.33
COL9A1-206ENST00000470652 TNNI2P48788 182 aa6.75□□□□□ -1.33
COL9A1-206ENST00000470652 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
COL9A1-206ENST00000470652 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.75□□□□□ -1.33
COL9A1-206ENST00000470652 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
COL9A1-206ENST00000470652 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
COL9A1-206ENST00000470652 CARMIL2Q6F5E8 1435 aa6.75□□□□□ -1.33
COL9A1-206ENST00000470652 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 RGS13O14921 159 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 CD8BP10966 210 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 IMPDH2P12268 514 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 RAG1P15918 1043 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 GBP1P32455 592 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 ARSHQ5FYA8 562 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 CDCP2Q5VXM1 449 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 C9orf131Q5VYM1 1079 aa6.74□□□□□ -1.33
COL9A1-206ENST00000470652 PIWIL2Q8TC59 973 aaKnown RBP6.74□□□□□ -1.33
COL9A1-206ENST00000470652 FARP2O94887 1054 aaPredicted RBP6.73□□□□□ -1.33
COL9A1-206ENST00000470652 TNK2Q07912 1038 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms