RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TTC12Q9H892 705 aaPredicted RBP9.24□□□□□ -0.93
SMC4-212ENST00000470240 GPBP1L1Q9HC44 474 aaPredicted RBP9.24□□□□□ -0.93
SMC4-212ENST00000470240 TOMM22Q9NS69 142 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 LRP2BPQ9P2M1 347 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 CLIP2Q9UDT6 1046 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 C4AP0C0L4 1744 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 C4BP0C0L5 1744 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 NRAPQ86VF7 1730 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 UBN2Q6ZU65 1347 aa9.24□□□□□ -0.93
SMC4-212ENST00000470240 BCORQ6W2J9 1755 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 SPTLC1O15269 473 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
SMC4-212ENST00000470240 ADD1P35611 737 aaKnown RBP9.23□□□□□ -0.93
SMC4-212ENST00000470240 ANTXR2P58335 489 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 AKAP17AQ02040 695 aaKnown RBP9.23□□□□□ -0.93
SMC4-212ENST00000470240 WTAPQ15007 396 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 CAVIN4Q5BKX8 364 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 AKNAD1Q5T1N1 836 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 SUSD4Q5VX71 490 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 TMED8Q6PL24 325 aaPredicted RBP9.23□□□□□ -0.93
SMC4-212ENST00000470240 APOA5Q6Q788 366 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 CLEC4GQ6UXB4 293 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 MICU3Q86XE3 530 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 VPS37DQ86XT2 251 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 ANKRD18AQ8IVF6 992 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 IFNL3Q8IZI9 196 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 LINC00301Q8NCQ3 95 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 UBAC1Q9BSL1 405 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 KDM4CQ9H3R0 1056 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 SPTLC3Q9NUV7 552 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 PCDHA7Q9UN72 937 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 CEP131Q9UPN4 1083 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 SLC4A4Q9Y6R1 1079 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
SMC4-212ENST00000470240 FAM177BA6PVY3 158 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 B4E1Z4 1266 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 PPP6R2O75170 966 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 POLR3DP05423 398 aaPredicted RBP9.22□□□□□ -0.93
SMC4-212ENST00000470240 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
SMC4-212ENST00000470240 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
SMC4-212ENST00000470240 FDPSP14324 419 aaKnown RBP9.22□□□□□ -0.93
SMC4-212ENST00000470240 CMA1P23946 247 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 GSDMDP57764 484 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
SMC4-212ENST00000470240 RASGRF1Q13972 1273 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 RTN1Q16799 776 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
SMC4-212ENST00000470240 SGMS1Q86VZ5 419 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 PLA2G4DQ86XP0 818 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 TBC1D10CQ8IV04 446 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 SYNE4Q8N205 404 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 STAG1Q8WVM7 1258 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 ESR2Q92731 530 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 MRFAP1L1Q96HT8 127 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 NUDT12Q9BQG2 462 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 BPIFA3Q9BQP9 254 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 NYXQ9GZU5 481 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 WWC3Q9ULE0 1092 aa9.22□□□□□ -0.93
SMC4-212ENST00000470240 A0A0G2JLW4 131 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 TCRBV5S4A2TA0A5A2 114 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 TNFRSF10AO00220 468 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 FOXP2O15409 715 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 MYO1BO43795 1136 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 CUTAO60888 179 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 CALM1P0DP23 149 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 CALM2P0DP24 149 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 CALM3P0DP25 149 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 SYKP43405 635 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 RBM6P78332 1123 aaKnown RBP9.21□□□□□ -0.94
SMC4-212ENST00000470240 FOXC1Q12948 553 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 UBE4AQ14139 1066 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 RRP12Q5JTH9 1297 aaKnown RBP9.21□□□□□ -0.94
SMC4-212ENST00000470240 KRT40Q6A162 431 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 OLFM4Q6UX06 510 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 FMR1NBQ8N0W7 255 aaPredicted RBP9.21□□□□□ -0.94
SMC4-212ENST00000470240 ENGASEQ8NFI3 743 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 MYRIPQ8NFW9 859 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.94
SMC4-212ENST00000470240 KIAA1524Q8TCG1 905 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 TIGD1Q96MW7 591 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 ZNF830Q96NB3 372 aaPredicted RBP9.21□□□□□ -0.94
SMC4-212ENST00000470240 PDCL3Q9H2J4 239 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 BRMS1Q9HCU9 246 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 RAI14Q9P0K7 980 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 DENND2AQ9ULE3 1009 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 NID2Q14112 1375 aa9.21□□□□□ -0.94
SMC4-212ENST00000470240 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
SMC4-212ENST00000470240 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
SMC4-212ENST00000470240 CBFA2T2O43439 604 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 IGSF3O75054 1194 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 NTSR2O95665 410 aa9.2□□□□□ -0.94
SMC4-212ENST00000470240 CYP7A1P22680 504 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms