RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 NUDT12Q9BQG2 462 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 DDX20Q9UHI6 824 aaKnown RBP10.34□□□□□ -0.75
LSM2-210ENST00000470086 PNMA3Q9UL41 463 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 SUGT1Q9Y2Z0 365 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 CFAP54Q96N23 3096 aa10.34□□□□□ -0.75
LSM2-210ENST00000470086 DMDP11532 3685 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 FAM86C2PA6NEL3 165 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 DNM1LO00429 736 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 CTNND1O60716 968 aaKnown RBP10.33□□□□□ -0.76
LSM2-210ENST00000470086 CYBAP13498 195 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 CYP2C19P33261 490 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 RHBDL3P58872 404 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 ERVK-9P63128 1117 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 ERVK-24P63145 666 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 PDE3AQ14432 1141 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 WDR43Q15061 677 aaKnown RBP eCLIP10.33□□□□□ -0.76
LSM2-210ENST00000470086 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 SLC39A5Q6ZMH5 540 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 ALYREFQ86V81 257 aaKnown RBP10.33□□□□□ -0.76
LSM2-210ENST00000470086 SOCS4Q8WXH5 440 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 ZNF576Q9H609 170 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
LSM2-210ENST00000470086 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 PRRC2BQ5JSZ5 2229 aaKnown RBP10.33□□□□□ -0.76
LSM2-210ENST00000470086 FANCIQ9NVI1 1328 aa10.33□□□□□ -0.76
LSM2-210ENST00000470086 TRIOO75962 3097 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 SNPHO15079 494 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 ENTPD3O75355 529 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 RABL6Q3YEC7 729 aaPredicted RBP10.32□□□□□ -0.76
LSM2-210ENST00000470086 CAVIN4Q5BKX8 364 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 ZNF280CQ8ND82 737 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 ATXN2LQ8WWM7 1075 aaKnown RBP10.32□□□□□ -0.76
LSM2-210ENST00000470086 SNX27Q96L92 541 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 PAGR1Q9BTK6 254 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 TANC1Q9C0D5 1861 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
LSM2-210ENST00000470086 RBAK-RBAKDNI3L0D1 243 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 GTPBP6O43824 516 aaPredicted RBP10.31□□□□□ -0.76
LSM2-210ENST00000470086 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
LSM2-210ENST00000470086 RGS2P41220 211 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 BTDP43251 543 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 PHKA1P46020 1223 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 RFX5P48382 616 aaPredicted RBP10.31□□□□□ -0.76
LSM2-210ENST00000470086 ZSCAN29Q8IWY8 852 aaPredicted RBP10.31□□□□□ -0.76
LSM2-210ENST00000470086 LPAR1Q92633 364 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 LENG1Q96BZ8 264 aaPredicted RBP10.31□□□□□ -0.76
LSM2-210ENST00000470086 PBX4Q9BYU1 374 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 UTYO14607 1347 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
LSM2-210ENST00000470086 BRWD1Q9NSI6 2320 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 ZNF318Q5VUA4 2279 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 BMP1P13497 986 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 ADORA1P30542 326 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 RALBP1Q15311 655 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
LSM2-210ENST00000470086 FAM47AQ5JRC9 791 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 PLEKHH3Q7Z736 793 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 TIFAQ96CG3 184 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.3□□□□□ -0.76
LSM2-210ENST00000470086 PRKAG2Q9UGJ0 569 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 MROH7-TTC4A0A0A0MT08 1334 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 SALL1Q9NSC2 1324 aa10.3□□□□□ -0.76
LSM2-210ENST00000470086 VAMP4O75379 141 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 LDHBP07195 334 aaKnown RBP10.29□□□□□ -0.76
LSM2-210ENST00000470086 CNGA1P29973 690 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 CAP2P40123 477 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 ADCYAP1R1P41586 468 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 IRX3P78415 501 aaPredicted RBP10.29□□□□□ -0.76
LSM2-210ENST00000470086 TLE2Q04725 743 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 C16orf59Q7L2K0 433 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 ATG9AQ7Z3C6 839 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 BTBD7Q9P203 1132 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.29□□□□□ -0.76
LSM2-210ENST00000470086 LCTP09848 1927 aa10.29□□□□□ -0.76
LSM2-210ENST00000470086 KMT2EQ8IZD2 1858 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 GDF11O95390 407 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 MAPK4P31152 587 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 HOXA7P31268 230 aaPredicted RBP10.28□□□□□ -0.76
LSM2-210ENST00000470086 MRPS5P82675 430 aaKnown RBP10.28□□□□□ -0.76
LSM2-210ENST00000470086 PRAMEF19Q5SWL8 479 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 PI16Q6UXB8 463 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 GPRC5AQ8NFJ5 357 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
LSM2-210ENST00000470086 OSBPL5Q9H0X9 879 aaPredicted RBP10.28□□□□□ -0.76
LSM2-210ENST00000470086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM2-210ENST00000470086 CD320Q9NPF0 282 aa10.28□□□□□ -0.76
LSM2-210ENST00000470086 YBX2Q9Y2T7 364 aaKnown RBP10.28□□□□□ -0.76
LSM2-210ENST00000470086 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 TBC1D12O60347 775 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 BACE1P56817 501 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 RASGRF1Q13972 1273 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 GRB14Q14449 540 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 LRRC41Q15345 812 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 CCDC184Q52MB2 194 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 AKNAD1Q5T1N1 836 aa10.27□□□□□ -0.77
LSM2-210ENST00000470086 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms