RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 HTRA3P83110 453 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 TMC6Q7Z403 805 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 ELOA2Q8IYF1 753 aaPredicted RBP6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 NFATC2IPQ8NCF5 419 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 FAM76AQ8TAV0 307 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 CLSTN2Q9H4D0 955 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 FLOT1O75955 427 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 GNG11P61952 73 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 CCDC96Q2M329 555 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 TSNAXIP1Q2TAA8 658 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 PPP1R21Q6ZMI0 780 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 RAB3IL1Q8TBN0 382 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 APPBP2Q92624 585 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 Q9H521 79 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 MBIPQ9NS73 344 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 FRMD4BQ9Y2L6 1034 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 CPSF1Q10570 1443 aaKnown RBP6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 UGGT1Q9NYU2 1555 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 MLH3Q9UHC1 1453 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 BCRP11274 1271 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 MYL6BP14649 208 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 ZHX3Q9H4I2 956 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 SYCP2Q9BX26 1530 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 MED14O60244 1454 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 A0A1B0GUL7 405 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 SPDYE3A6NKU9 549 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 GOLGA8KD6RF30 607 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 SKILP12757 684 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 GCFC2P16383 781 aaKnown RBP6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 SPOUT1Q5T280 376 aaKnown RBP6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 ABHD8Q96I13 439 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 CAPNS2Q96L46 248 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 CIAO1O76071 339 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 SDSP20132 328 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 PABPC4Q13310 644 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 CIAPIN1Q6FI81 312 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 VCX3AQ9NNX9 186 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 PAG1Q9NWQ8 432 aa6.83□□□□□ -1.32
CCDC144A-212ENST00000470068 MAGEB6P1A0A0J9YX57 407 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 GOLGA8MH3BSY2 632 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 CETN3O15182 167 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 ZBTB24O43167 697 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TCP1P17987 556 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 SLC8A1P32418 973 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 DEUP1Q05D60 604 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 HLTFQ14527 1009 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 KLRG1Q96E93 195 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 MRFAP1L1Q96HT8 127 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 DRC1Q96MC2 740 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 NAPGQ99747 312 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 ARHGEF10LQ9HCE6 1279 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 ATP8A2Q9NTI2 1148 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 ARPP21Q9UBL0 812 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 MAP3K2Q9Y2U5 619 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 RBM8AQ9Y5S9 174 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 A0A1W2PRG0 241 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 KIF28PB7ZC32 967 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 DDAH1O94760 285 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 POLR2BP30876 1174 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 KPNA2P52292 529 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 SEPT6Q14141 434 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 SURF1Q15526 300 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 SUPT20HL1Q3ZLR7 823 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 ODR4Q5SWX8 454 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 RBM46Q8TBY0 533 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 COA7Q96BR5 231 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 CCDC85AQ96PX6 553 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 STK17AQ9UEE5 414 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 PRC1O43663 620 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 CSPG5O95196 566 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TSPY3P0CV98 308 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TSPY8P0CW00 308 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 NLRP12P59046 1061 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 KRT39Q6A163 491 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 SLFN12Q8IYM2 578 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 SYNE4Q8N205 404 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 PPP2R3CQ969Q6 453 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 PBRM1Q86U86 1689 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 KLF18A0A0U1RQI7 1052 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TMCO5BA8MYB1 307 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 CLGNO14967 610 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 RANBP6O60518 1105 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 ERCC5P28715 1186 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 EPHX2P34913 555 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TYRO3Q06418 890 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 MAP7D1Q3KQU3 841 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 HSP90AA5PQ58FG0 334 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 OTUD6BQ8N6M0 293 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TRIM58Q8NG06 486 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 HVCN1Q96D96 273 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 PPCSQ9HAB8 311 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 TXNDC16Q9P2K2 825 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 WDR17Q8IZU2 1322 aa6.82□□□□□ -1.32
CCDC144A-212ENST00000470068 FAM13AO94988 1023 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms