RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 RASGRF1Q13972 1273 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 NPY5RQ15761 445 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 MTRQ99707 1265 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CDC23Q9UJX2 597 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 COL4A1P02462 1669 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CDC25AP30304 524 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CASP14P31944 242 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 ACRBPQ8NEB7 543 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
SMC4-210ENST00000469762 COL5A2P05997 1499 aaPredicted RBP11.72□□□□□ -0.53
SMC4-210ENST00000469762 MAGEB6Q8N7X4 407 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 STAG1Q8WVM7 1258 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 AIDAQ96BJ3 306 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 ADAMTS3O15072 1205 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 ATP2B1P20020 1258 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 BRD3Q15059 726 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 RTN1Q16799 776 aa11.71□□□□□ -0.53
SMC4-210ENST00000469762 AATFQ9NY61 560 aaKnown RBP eCLIP11.71□□□□□ -0.534e-8■■■■■ 116
SMC4-210ENST00000469762 AFMP43652 599 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 SEC23AQ15436 765 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 TXLNBQ8N3L3 684 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 ABCB6Q9NP58 842 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.54
SMC4-210ENST00000469762 KLHL10Q6JEL2 608 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 SLC35F6Q8N357 371 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 TNFRSF25Q93038 417 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 ITGB4P16144 1822 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 DEXIO95424 95 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 VSNL1P62760 191 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 AMPD2Q01433 879 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 SPATA5Q8NB90 893 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 EXOC4Q96A65 974 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 NAPBQ9H115 298 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 REXO2Q9Y3B8 237 aaKnown RBP11.7□□□□□ -0.54
SMC4-210ENST00000469762 XDHP47989 1333 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 SYNRGQ9UMZ2 1314 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 DISP2A7MBM2 1401 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 ZNF569Q5MCW4 686 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 ADGRA1Q86SQ6 560 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 NOA1Q8NC60 698 aaKnown RBP11.7□□□□□ -0.54
SMC4-210ENST00000469762 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
SMC4-210ENST00000469762 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
SMC4-210ENST00000469762 hCG_1642624A0A1W2PR95 340 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 ANKRD18BA2A2Z9 1011 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 STAMQ92783 540 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 PHF20Q9BVI0 1012 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
SMC4-210ENST00000469762 LRRC10BA6NIK2 292 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 E2F4Q16254 413 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 MFSD6Q6ZSS7 791 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 WASF1Q92558 559 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 NAA15Q9BXJ9 866 aaKnown RBP11.69□□□□□ -0.54
SMC4-210ENST00000469762 VPS54Q9P1Q0 977 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 IRS4O14654 1257 aaPredicted RBP11.69□□□□□ -0.54
SMC4-210ENST00000469762 PRDM1O75626 825 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 WTAPQ15007 396 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 IL17AQ16552 155 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
SMC4-210ENST00000469762 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 PIGBQ92521 554 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 COL22A1Q8NFW1 1626 aaPredicted RBP11.69□□□□□ -0.54
SMC4-210ENST00000469762 TRIM66O15016 1216 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
SMC4-210ENST00000469762 MSL3Q8N5Y2 521 aaKnown RBP11.69□□□□□ -0.54
SMC4-210ENST00000469762 DLEC1Q9Y238 1755 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 ITIH6Q6UXX5 1313 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 MCM6Q14566 821 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 KRT31Q15323 416 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 IQUBQ8NA54 791 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 KRT23Q9C075 422 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 CNNM2Q9H8M5 875 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 TRIM10Q9UDY6 481 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 LRRIQ3A6PVS8 624 aaPredicted RBP11.68□□□□□ -0.54
SMC4-210ENST00000469762 SAFBQ15424 915 aaKnown RBP eCLIP11.68□□□□□ -0.542e-9■■□□□ 11.5
SMC4-210ENST00000469762 LPIN2Q92539 896 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
SMC4-210ENST00000469762 BAZ2AQ9UIF9 1905 aaKnown RBP11.68□□□□□ -0.54
SMC4-210ENST00000469762 CCT6AP40227 531 aaKnown RBP11.68□□□□□ -0.54
SMC4-210ENST00000469762 PUM3Q15397 648 aaKnown RBP11.68□□□□□ -0.54
SMC4-210ENST00000469762 CT47A1Q5JQC4 288 aaPredicted RBP11.68□□□□□ -0.54
SMC4-210ENST00000469762 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
SMC4-210ENST00000469762 UQCRFS1P1P0C7P4 283 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms