RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 ZMYM1Q5SVZ6 1142 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 NAA16Q6N069 864 aaPredicted RBP6.28□□□□□ -1.4
ITGA6-208ENST00000469534 ARHGAP27Q6ZUM4 889 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 ERICH6Q7L0X2 663 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 DZIP1Q86YF9 867 aaKnown RBP6.28□□□□□ -1.4
ITGA6-208ENST00000469534 LCORLQ8N3X6 602 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 PROCA1Q8NCQ7 364 aaPredicted RBP6.28□□□□□ -1.4
ITGA6-208ENST00000469534 ZNF384Q8TF68 577 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 RUFY2Q8WXA3 655 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 SYT17Q9BSW7 474 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 C22orf23Q9BZE7 217 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 FAM117AQ9C073 453 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 KDM4CQ9H3R0 1056 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 GPBP1L1Q9HC44 474 aaPredicted RBP6.28□□□□□ -1.4
ITGA6-208ENST00000469534 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 PCDHAC2Q9Y5I4 1007 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 NAV1Q8NEY1 1877 aa6.28□□□□□ -1.4
ITGA6-208ENST00000469534 CCDC171Q6TFL3 1326 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 ECM29Q5VYK3 1845 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 MYH1P12882 1939 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 SHTN1A0MZ66 631 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 SOCS7O14512 581 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 GPAA1O43292 621 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 LDHBP07195 334 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 IL1R1P14778 569 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 YBX3P16989 372 aaKnown RBP eCLIP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 IARSP41252 1262 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 HAND2P61296 217 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 MECOMQ03112 1051 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 TTF1Q15361 905 aaPredicted RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 MCMDC2Q4G0Z9 681 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 MFSD14BQ5SR56 506 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 TTLL5Q6EMB2 1281 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 PDXDC2PQ6P474 469 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 KIAA1211Q6ZU35 1233 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 C15orf52Q6ZUT6 534 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 NOL8Q76FK4 1167 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 KIAA0825Q8IV33 1275 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 NIM1KQ8IY84 436 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 CERS5Q8N5B7 392 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 APPBP2Q92624 585 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 USP26Q9BXU7 913 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 COA1Q9GZY4 146 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 LSG1Q9H089 658 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 TAOK3Q9H2K8 898 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 UPF2Q9HAU5 1272 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 AATFQ9NY61 560 aaKnown RBP eCLIP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 RBM8AQ9Y5S9 174 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 TAF6LQ9Y6J9 622 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 TIAM2Q8IVF5 1701 aa6.27□□□□□ -1.41
ITGA6-208ENST00000469534 DICER1Q9UPY3 1922 aaKnown RBP6.27□□□□□ -1.41
ITGA6-208ENST00000469534 MAGEB6P1A0A0J9YX57 407 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 SMIM22K7EJ46 135 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 HIP1O00291 1037 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 PSMD14O00487 310 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 REC8O95072 547 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 APPP05067 770 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 CPA1P15085 419 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 KIAA2012Q0VF49 1180 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 COL9A3Q14050 684 aaPredicted RBP6.26□□□□□ -1.41
ITGA6-208ENST00000469534 ZSCAN25Q6NSZ9 544 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 RTKN2Q8IZC4 609 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 SUPT20HQ8NEM7 779 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 SDR42E1Q8WUS8 393 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 LRRN4Q8WUT4 740 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 AIDAQ96BJ3 306 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 NSUN4Q96CB9 384 aaKnown RBP6.26□□□□□ -1.41
ITGA6-208ENST00000469534 DDRGK1Q96HY6 314 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 TBC1D32Q96NH3 1257 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 RTFDC1Q9BY42 306 aaPredicted RBP6.26□□□□□ -1.41
ITGA6-208ENST00000469534 HELLSQ9NRZ9 838 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 TTF2Q9UNY4 1162 aaKnown RBP6.26□□□□□ -1.41
ITGA6-208ENST00000469534 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 SLC4A4Q9Y6R1 1079 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 LAMB1P07942 1786 aa6.26□□□□□ -1.41
ITGA6-208ENST00000469534 CYP2D7A0A087X1C5 515 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 SOBPA7XYQ1 873 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 DTNBO60941 627 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 VSIG8P0DPA2 414 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 CYP2D6P10635 497 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 HSPD1P10809 573 aaKnown RBP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 BTDP43251 543 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 RBM5P52756 815 aaKnown RBP eCLIP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 CACNB3P54284 484 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 GPR162Q16538 588 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 CC2D2BQ6DHV5 1058 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 VASH1Q7L8A9 365 aaPredicted RBP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 MEIOBQ8N635 442 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 SH3RF3Q8TEJ3 882 aaPredicted RBP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 TCEANC2Q96MN5 208 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 EPB41L4AQ9HCS5 686 aaPredicted RBP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 INCENPQ9NQS7 918 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 SAP30BPQ9UHR5 308 aaKnown RBP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 SCAF8Q9UPN6 1271 aaKnown RBP6.25□□□□□ -1.41
ITGA6-208ENST00000469534 RFX7Q2KHR2 1363 aa6.25□□□□□ -1.41
ITGA6-208ENST00000469534 MYH8P13535 1937 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms