RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 TMEM39AQ9NV64 488 aa7.75□□□□□ -1.17
VPS8-219ENST00000469479 PDZD3Q86UT5 571 aa7.74□□□□□ -1.17
VPS8-219ENST00000469479 AMIGO3Q86WK7 504 aa7.74□□□□□ -1.17
VPS8-219ENST00000469479 CCDC74AQ96AQ1 378 aa7.74□□□□□ -1.17
VPS8-219ENST00000469479 PRDM10Q9NQV6 1147 aa7.74□□□□□ -1.17
VPS8-219ENST00000469479 EGFL7Q9UHF1 273 aa7.74□□□□□ -1.17
VPS8-219ENST00000469479 SUPT6HQ7KZ85 1726 aaKnown RBP7.74□□□□□ -1.17
VPS8-219ENST00000469479 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 NDUFB5O43674 189 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 C1QTNF9P0C862 333 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 ORC1Q13415 861 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 NKPD1Q17RQ9 610 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 PHLDB3Q6NSJ2 640 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 FBXO15Q8NCQ5 510 aaPredicted RBP7.73□□□□□ -1.17
VPS8-219ENST00000469479 PPP4R2Q9NY27 417 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 RNF17Q9BXT8 1623 aaKnown RBP7.73□□□□□ -1.17
VPS8-219ENST00000469479 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 FAM135AQ9P2D6 1515 aa7.73□□□□□ -1.17
VPS8-219ENST00000469479 SYNMO15061 1565 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 ICMTO60725 284 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 CTSWP56202 376 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 DTHD1Q6ZMT9 781 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 GPN3Q9UHW5 284 aaPredicted RBP7.72□□□□□ -1.17
VPS8-219ENST00000469479 MED14O60244 1454 aa7.72□□□□□ -1.17
VPS8-219ENST00000469479 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
VPS8-219ENST00000469479 KIDINS220Q9ULH0 1771 aa7.71□□□□□ -1.17
VPS8-219ENST00000469479 DNMT1P26358 1616 aaKnown RBP7.71□□□□□ -1.17
VPS8-219ENST00000469479 PREX2Q70Z35 1606 aa7.71□□□□□ -1.17
VPS8-219ENST00000469479 PLEKHH2Q8IVE3 1493 aa7.71□□□□□ -1.18
VPS8-219ENST00000469479 PPP1R15AO75807 674 aaPredicted RBP7.71□□□□□ -1.18
VPS8-219ENST00000469479 THEMISQ8N1K5 641 aaPredicted RBP7.71□□□□□ -1.18
VPS8-219ENST00000469479 CCDC120Q96HB5 630 aa7.71□□□□□ -1.18
VPS8-219ENST00000469479 EMILIN2Q9BXX0 1053 aa7.71□□□□□ -1.18
VPS8-219ENST00000469479 RGS17Q9UGC6 210 aaPredicted RBP7.71□□□□□ -1.18
VPS8-219ENST00000469479 POLR1AO95602 1720 aaPredicted RBP7.71□□□□□ -1.18
VPS8-219ENST00000469479 ITSN2Q9NZM3 1697 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 A2MP01023 1474 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 NLRP1Q9C000 1473 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 EIF1AYO14602 144 aaKnown RBP7.7□□□□□ -1.18
VPS8-219ENST00000469479 KRT1P04264 644 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
VPS8-219ENST00000469479 ARNTP27540 789 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 GDNFP39905 211 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
VPS8-219ENST00000469479 GRM2Q14416 872 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 FAM129BQ96TA1 746 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 PLXNC1O60486 1568 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 SAMD9LQ8IVG5 1584 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 VWDEQ8N2E2 1590 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 NEURL4Q96JN8 1562 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 TNRQ92752 1358 aa7.7□□□□□ -1.18
VPS8-219ENST00000469479 CLTCQ00610 1675 aaKnown RBP7.7□□□□□ -1.18
VPS8-219ENST00000469479 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
VPS8-219ENST00000469479 INHBBP09529 407 aa7.69□□□□□ -1.18
VPS8-219ENST00000469479 TMEM253P0C7T8 217 aa7.69□□□□□ -1.18
VPS8-219ENST00000469479 SULF2Q8IWU5 870 aa7.69□□□□□ -1.18
VPS8-219ENST00000469479 CSRNP1Q96S65 589 aa7.69□□□□□ -1.18
VPS8-219ENST00000469479 ALKQ9UM73 1620 aa7.69□□□□□ -1.18
VPS8-219ENST00000469479 KIAA1107Q9UPP5 1409 aa7.69□□□□□ -1.18
VPS8-219ENST00000469479 ATP7AQ04656 1500 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 NPAS4Q8IUM7 802 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 GLYCTKQ8IVS8 523 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 FOXQ1Q9C009 403 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 CARS2Q9HA77 564 aaKnown RBP7.68□□□□□ -1.18
VPS8-219ENST00000469479 PRDM5Q9NQX1 630 aaPredicted RBP7.68□□□□□ -1.18
VPS8-219ENST00000469479 MAPK8IP1Q9UQF2 711 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 CCDC18Q5T9S5 1454 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 LRRC7Q96NW7 1537 aa7.68□□□□□ -1.18
VPS8-219ENST00000469479 CDC42BPBQ9Y5S2 1711 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 NPIPB6E9PJ23 425 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 NME2P22392 152 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 FCGRTP55899 365 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 MAP1SQ66K74 1059 aaPredicted RBP7.67□□□□□ -1.18
VPS8-219ENST00000469479 GGT6Q6P531 493 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 GPBAR1Q8TDU6 330 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 ACSBG1Q96GR2 724 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 NSUN3Q9H649 340 aaKnown RBP7.67□□□□□ -1.18
VPS8-219ENST00000469479 FAM135BQ49AJ0 1406 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 PZPP20742 1482 aa7.67□□□□□ -1.18
VPS8-219ENST00000469479 EOMESO95936 686 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 KCT2Q8NC54 265 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 DIRC2Q96SL1 478 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS8-219ENST00000469479 UGGT1Q9NYU2 1555 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 INO80Q9ULG1 1556 aaPredicted RBP7.66□□□□□ -1.18
VPS8-219ENST00000469479 SRCAPQ6ZRS2 3230 aa7.66□□□□□ -1.18
VPS8-219ENST00000469479 H3BRB1 525 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 FANCGO15287 622 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 ZNF252P-AS1Q0IIN9 211 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 KCNA10Q16322 511 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 PPM1JQ5JR12 505 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 CIAPIN1Q6FI81 312 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 STK35Q8TDR2 534 aa7.65□□□□□ -1.18
VPS8-219ENST00000469479 EPS8L3Q8TE67 593 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms