RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NFXL1Q6ZNB6 911 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 TMTC2Q8N394 836 aa20.53■□□□□ 0.88
RPL39-202ENST00000468844 TRPM7Q96QT4 1865 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 CUL4AQ13619 759 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 NECAB1Q8N987 351 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 MTMR4Q9NYA4 1195 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 NAP1L2Q9ULW6 460 aaPredicted RBP20.52■□□□□ 0.88
RPL39-202ENST00000468844 FZD1Q9UP38 647 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
RPL39-202ENST00000468844 GOLGA8BA8MQT2 603 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 GUCY1A2P33402 732 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 SPRYD3Q8NCJ5 442 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 ANKS1AQ92625 1134 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 GTF3C6Q969F1 213 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 MYL10Q9BUA6 226 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 DAXXQ9UER7 740 aaPredicted RBP20.51■□□□□ 0.87
RPL39-202ENST00000468844 SLC12A7Q9Y666 1083 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 PTPRFP10586 1907 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 PFKFB2O60825 505 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 GH2P01242 217 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 RXRAP19793 462 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 SCRN1Q12765 414 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 DCAF15Q66K64 600 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 USP48Q86UV5 1035 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 MICU3Q86XE3 530 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 ZNF654Q8IZM8 581 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 HOOK2Q96ED9 719 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 GLIS2Q9BZE0 524 aaPredicted RBP20.51■□□□□ 0.87
RPL39-202ENST00000468844 CLEC11AQ9Y240 323 aa20.51■□□□□ 0.87
RPL39-202ENST00000468844 CAP2P40123 477 aa20.5■□□□□ 0.87
RPL39-202ENST00000468844 SEPT2Q15019 361 aa20.5■□□□□ 0.87
RPL39-202ENST00000468844 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
RPL39-202ENST00000468844 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
RPL39-202ENST00000468844 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
RPL39-202ENST00000468844 ZBTB43O43298 467 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 CCT2P78371 535 aaKnown RBP20.49■□□□□ 0.87
RPL39-202ENST00000468844 TROAPQ12815 778 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 MAP1SQ66K74 1059 aaPredicted RBP20.49■□□□□ 0.87
RPL39-202ENST00000468844 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 ZBTB21Q9ULJ3 1066 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 NID2Q14112 1375 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 TTLL1O95922 423 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 PNMA1Q8ND90 353 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 CDCA5Q96FF9 252 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 ZNF341Q9BYN7 854 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
RPL39-202ENST00000468844 CABP5Q9NP86 173 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
RPL39-202ENST00000468844 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.49■□□□□ 0.87
RPL39-202ENST00000468844 HSP90AA1P07900 732 aaKnown RBP20.48■□□□□ 0.87
RPL39-202ENST00000468844 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
RPL39-202ENST00000468844 KAT14Q9H8E8 782 aa20.48■□□□□ 0.87
RPL39-202ENST00000468844 KANSL2Q9H9L4 492 aa20.48■□□□□ 0.87
RPL39-202ENST00000468844 ZNF112Q9UJU3 913 aa20.48■□□□□ 0.87
RPL39-202ENST00000468844 INPP5BP32019 993 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 METAP2P50579 478 aaKnown RBP eCLIP20.47■□□□□ 0.871e-6■■□□□ 12.8
RPL39-202ENST00000468844 ICA1Q05084 483 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 CATIPQ7Z7H3 387 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 LDHDQ86WU2 507 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 KLRG1Q96E93 195 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 DTNBO60941 627 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 RCAN1P53805 252 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 SIAH1Q8IUQ4 282 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 INTS4Q96HW7 963 aaKnown RBP20.47■□□□□ 0.87
RPL39-202ENST00000468844 WRNIP1Q96S55 665 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 CLIP2Q9UDT6 1046 aa20.47■□□□□ 0.87
RPL39-202ENST00000468844 CTNND1O60716 968 aaKnown RBP20.46■□□□□ 0.87
RPL39-202ENST00000468844 ASNSP08243 561 aa20.46■□□□□ 0.87
RPL39-202ENST00000468844 TOP1P11387 765 aaKnown RBP20.46■□□□□ 0.87
RPL39-202ENST00000468844 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
RPL39-202ENST00000468844 CDC27P30260 824 aa20.46■□□□□ 0.87
RPL39-202ENST00000468844 PRKG1Q13976 671 aa20.46■□□□□ 0.87
RPL39-202ENST00000468844 SYNE3Q6ZMZ3 975 aa20.46■□□□□ 0.87
RPL39-202ENST00000468844 LRRC47Q8N1G4 583 aaKnown RBP20.46■□□□□ 0.87
RPL39-202ENST00000468844 NUP133Q8WUM0 1156 aa20.46■□□□□ 0.87
RPL39-202ENST00000468844 USP2O75604 605 aaPredicted RBP20.45■□□□□ 0.86
RPL39-202ENST00000468844 DDAH1O94760 285 aa20.45■□□□□ 0.86
RPL39-202ENST00000468844 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
RPL39-202ENST00000468844 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
RPL39-202ENST00000468844 GOLGA8AA7E2F4 631 aa20.45■□□□□ 0.86
RPL39-202ENST00000468844 ADD1P35611 737 aaKnown RBP20.45■□□□□ 0.86
RPL39-202ENST00000468844 ATP2B2Q01814 1243 aa20.45■□□□□ 0.86
RPL39-202ENST00000468844 RASGRP2Q7LDG7 609 aa20.45■□□□□ 0.86
RPL39-202ENST00000468844 ZKSCAN4Q969J2 545 aaPredicted RBP20.45■□□□□ 0.86
RPL39-202ENST00000468844 MKL1Q969V6 931 aa20.45■□□□□ 0.86
RPL39-202ENST00000468844 CTDNEP1O95476 244 aa20.44■□□□□ 0.86
RPL39-202ENST00000468844 PPP4R3BQ5MIZ7 849 aa20.44■□□□□ 0.86
RPL39-202ENST00000468844 FANCBQ8NB91 859 aa20.44■□□□□ 0.86
RPL39-202ENST00000468844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.44■□□□□ 0.86
RPL39-202ENST00000468844 TRAF5O00463 557 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
RPL39-202ENST00000468844 FMR1Q06787 632 aaKnown RBP eCLIP20.43■□□□□ 0.86
RPL39-202ENST00000468844 CCDC84Q86UT8 332 aaPredicted RBP20.43■□□□□ 0.86
RPL39-202ENST00000468844 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms