RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 FAM83AQ86UY5 434 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 KAT14Q9H8E8 782 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 MYOZ2Q9NPC6 264 aa17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
CRAMP1-206ENST00000468839 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 WNT10BO00744 389 aa17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 MYO1BO43795 1136 aa17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 PNMA1Q8ND90 353 aa17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
CRAMP1-206ENST00000468839 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 TOP1P11387 765 aaKnown RBP17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 AKR1B1P15121 316 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 GMPSP49915 693 aaPredicted RBP17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 FUT2Q10981 343 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 RESTQ13127 1097 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 ZSCAN29Q8IWY8 852 aaPredicted RBP17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 CTCFLQ8NI51 663 aaPredicted RBP17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 WASF1Q92558 559 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 RNF26Q9BY78 433 aaPredicted RBP17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 DNAJC18Q9H819 358 aa17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 CNOT7Q9UIV1 285 aaKnown RBP17.46■□□□□ 0.39
CRAMP1-206ENST00000468839 ATAD5Q96QE3 1844 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 CLRN2A0PK11 232 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 PRPF3O43395 683 aaKnown RBP17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 KIF5BP33176 963 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 GRM4Q14833 912 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 TRIM22Q8IYM9 498 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 PHKBQ93100 1093 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 CEP95Q96GE4 821 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 MTMR4Q9NYA4 1195 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 HERC5Q9UII4 1024 aaKnown RBP17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
CRAMP1-206ENST00000468839 DEXIO95424 95 aa17.44■□□□□ 0.38
CRAMP1-206ENST00000468839 GNAQP50148 359 aa17.44■□□□□ 0.38
CRAMP1-206ENST00000468839 NBPF9Q3BBW0 867 aa17.44■□□□□ 0.38
CRAMP1-206ENST00000468839 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
CRAMP1-206ENST00000468839 PGAP2Q9UHJ9 254 aa17.44■□□□□ 0.38
CRAMP1-206ENST00000468839 GJA3Q9Y6H8 435 aa17.44■□□□□ 0.38
CRAMP1-206ENST00000468839 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 TBC1D12O60347 775 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 PPFIA3O75145 1194 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 TNNI2P48788 182 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 SKOR2Q2VWA4 1001 aaPredicted RBP17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 TMEM87AQ8NBN3 555 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
CRAMP1-206ENST00000468839 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 TTLL1O95922 423 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 MAP3K10Q02779 954 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 GPC2Q8N158 579 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 CSRNP1Q96S65 589 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 VEZTQ9HBM0 779 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 CNTNAP5Q8WYK1 1306 aa17.42■□□□□ 0.38
CRAMP1-206ENST00000468839 H7C1D1 291 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 TRAK2O60296 914 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 PLEKHA8P1O95397 391 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 YBX3P16989 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 SMARCA1P28370 1054 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 AKAP17AQ02040 695 aaKnown RBP17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 ATL3Q6DD88 541 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 MKL1Q969V6 931 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 NYAP2Q9P242 653 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 MAD2L2Q9UI95 211 aa17.41■□□□□ 0.38
CRAMP1-206ENST00000468839 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 SLURP2P0DP57 97 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 FOSBP53539 338 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 KRT85P78386 507 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 DNM1Q05193 864 aaKnown RBP17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 TNFAIP1Q13829 316 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 PKN1Q16512 942 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 KRT40Q6A162 431 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 TMEM179Q6ZVK1 233 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 CMTR1Q8N1G2 835 aaKnown RBP17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 KANSL2Q9H9L4 492 aa17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.4■□□□□ 0.38
CRAMP1-206ENST00000468839 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 EGFRP00533 1210 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 GUCY1A2P33402 732 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms