RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SLC44A5Q8NCS7 719 aa26.26■■□□□ 1.79
TTC28-204ENST00000468807 U2AF1L4Q8WU68 220 aaKnown RBP26.26■■□□□ 1.79
TTC28-204ENST00000468807 GPATCH3Q96I76 525 aa26.26■■□□□ 1.79
TTC28-204ENST00000468807 USP17L15C9J2P7 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L13C9JLJ4 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L11C9JVI0 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L18D6R9N7 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L22D6RA61 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L17D6RBQ6 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L19D6RCP7 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L20D6RJB6 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 USP17L24Q0WX57 530 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 GTF3C2Q8WUA4 911 aaPredicted RBP26.25■■□□□ 1.79
TTC28-204ENST00000468807 DDRGK1Q96HY6 314 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 C12orf42Q96LP6 360 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 KIAA1683Q9H0B3 1180 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 DCTPP1Q9H773 170 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 CWC22Q9HCG8 908 aaKnown RBP26.25■■□□□ 1.79
TTC28-204ENST00000468807 RBPJLQ9UBG7 517 aa26.25■■□□□ 1.79
TTC28-204ENST00000468807 VCAM1P19320 739 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 GUCY1A2P33402 732 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 ERVK-9P63128 1117 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 ERVK-24P63145 666 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 UBE3CQ15386 1083 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 TSHZ3Q63HK5 1081 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 AMOTL1Q8IY63 956 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 DYNLL2Q96FJ2 89 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 ATP8A2Q9NTI2 1148 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 SLC4A4Q9Y6R1 1079 aa26.24■■□□□ 1.79
TTC28-204ENST00000468807 CYP2B6P20813 491 aa26.23■■□□□ 1.79
TTC28-204ENST00000468807 GCC1Q96CN9 775 aa26.23■■□□□ 1.79
TTC28-204ENST00000468807 DEFB118Q96PH6 123 aa26.23■■□□□ 1.79
TTC28-204ENST00000468807 SWAP70Q9UH65 585 aa26.23■■□□□ 1.79
TTC28-204ENST00000468807 GJD2Q9UKL4 321 aa26.23■■□□□ 1.79
TTC28-204ENST00000468807 CEP290O15078 2479 aa26.23■■□□□ 1.79
TTC28-204ENST00000468807 SGPL1O95470 568 aa26.22■■□□□ 1.79
TTC28-204ENST00000468807 TFRCP02786 760 aaKnown RBP26.22■■□□□ 1.79
TTC28-204ENST00000468807 HMGCRP04035 888 aa26.22■■□□□ 1.79
TTC28-204ENST00000468807 Q3C1V9 767 aa26.22■■□□□ 1.79
TTC28-204ENST00000468807 DPF3Q92784 378 aa26.22■■□□□ 1.79
TTC28-204ENST00000468807 RPAP3Q9H6T3 665 aaPredicted RBP26.22■■□□□ 1.79
TTC28-204ENST00000468807 PLXNB2O15031 1838 aa26.21■■□□□ 1.79
TTC28-204ENST00000468807 CYP2D7A0A087X1C5 515 aa26.21■■□□□ 1.79
TTC28-204ENST00000468807 FARP2O94887 1054 aaPredicted RBP26.21■■□□□ 1.79
TTC28-204ENST00000468807 MAPK4P31152 587 aa26.21■■□□□ 1.79
TTC28-204ENST00000468807 CATSPERGQ6ZRH7 1159 aa26.21■■□□□ 1.79
TTC28-204ENST00000468807 NUDT12Q9BQG2 462 aa26.21■■□□□ 1.79
TTC28-204ENST00000468807 PUS7LQ9H0K6 701 aaKnown RBP26.21■■□□□ 1.79
TTC28-204ENST00000468807 USP17L12C9JPN9 530 aa26.2■■□□□ 1.78
TTC28-204ENST00000468807 USP17L21D6R901 530 aa26.2■■□□□ 1.78
TTC28-204ENST00000468807 WDR78Q5VTH9 848 aa26.2■■□□□ 1.78
TTC28-204ENST00000468807 TMEM179Q6ZVK1 233 aa26.2■■□□□ 1.78
TTC28-204ENST00000468807 SOCS4Q8WXH5 440 aa26.2■■□□□ 1.78
TTC28-204ENST00000468807 PORCNQ9H237 461 aa26.2■■□□□ 1.78
TTC28-204ENST00000468807 TRIM32Q13049 653 aa26.19■■□□□ 1.78
TTC28-204ENST00000468807 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.19■■□□□ 1.78
TTC28-204ENST00000468807 PAK6Q9NQU5 681 aaPredicted RBP26.19■■□□□ 1.78
TTC28-204ENST00000468807 RABGAP1Q9Y3P9 1069 aa26.19■■□□□ 1.78
TTC28-204ENST00000468807 PCDHB15Q9Y5E8 787 aa26.19■■□□□ 1.78
TTC28-204ENST00000468807 A0A1W2PRG0 241 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 SMIM22K7EJ46 135 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 AKR1B1P15121 316 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 RRP1P56182 461 aaKnown RBP26.18■■□□□ 1.78
TTC28-204ENST00000468807 C12orf60Q5U649 245 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 POTEEQ6S8J3 1075 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 GPR142Q7Z601 462 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 PLEKHH3Q7Z736 793 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 TRIB2Q92519 343 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 YTHDC1Q96MU7 727 aaKnown RBP26.18■■□□□ 1.78
TTC28-204ENST00000468807 HTATIP2Q9BUP3 242 aa26.18■■□□□ 1.78
TTC28-204ENST00000468807 CCNA1P78396 465 aa26.17■■□□□ 1.78
TTC28-204ENST00000468807 CLEC10AQ8IUN9 316 aa26.17■■□□□ 1.78
TTC28-204ENST00000468807 KBTBD3Q8NAB2 608 aa26.17■■□□□ 1.78
TTC28-204ENST00000468807 TANGO6Q9C0B7 1094 aa26.17■■□□□ 1.78
TTC28-204ENST00000468807 ARHGEF10LQ9HCE6 1279 aa26.17■■□□□ 1.78
TTC28-204ENST00000468807 H0YGN5 161 aa26.16■■□□□ 1.78
TTC28-204ENST00000468807 CNMDO75829 334 aa26.16■■□□□ 1.78
TTC28-204ENST00000468807 CDK8P49336 464 aa26.16■■□□□ 1.78
TTC28-204ENST00000468807 ICA1Q05084 483 aa26.16■■□□□ 1.78
TTC28-204ENST00000468807 HMX1Q9NP08 348 aaPredicted RBP26.16■■□□□ 1.78
TTC28-204ENST00000468807 ZKSCAN1P17029 563 aaPredicted RBP26.15■■□□□ 1.78
TTC28-204ENST00000468807 RGS2P41220 211 aa26.15■■□□□ 1.78
TTC28-204ENST00000468807 CTR9Q6PD62 1173 aa26.15■■□□□ 1.78
TTC28-204ENST00000468807 UBE2Q1Q7Z7E8 422 aa26.15■■□□□ 1.78
TTC28-204ENST00000468807 RPTORQ8N122 1335 aa26.14■■□□□ 1.78
TTC28-204ENST00000468807 SPDYE16A6NNV3 312 aaPredicted RBP26.14■■□□□ 1.78
TTC28-204ENST00000468807 GLRX3O76003 335 aaKnown RBP26.14■■□□□ 1.78
TTC28-204ENST00000468807 ATP2B2Q01814 1243 aa26.14■■□□□ 1.78
TTC28-204ENST00000468807 C16orf86Q6ZW13 317 aa26.14■■□□□ 1.78
TTC28-204ENST00000468807 CCDC17Q96LX7 622 aa26.14■■□□□ 1.78
TTC28-204ENST00000468807 STRBPQ96SI9 672 aaKnown RBP26.14■■□□□ 1.78
TTC28-204ENST00000468807 BTBD7Q9P203 1132 aa26.14■■□□□ 1.78
TTC28-204ENST00000468807 ARPP21Q9UBL0 812 aaPredicted RBP26.14■■□□□ 1.78
TTC28-204ENST00000468807 XRCC5P13010 732 aaKnown RBP26.13■■□□□ 1.77
TTC28-204ENST00000468807 PRKAR2AP13861 404 aaKnown RBP26.13■■□□□ 1.77
TTC28-204ENST00000468807 HABP4Q5JVS0 413 aaKnown RBP26.13■■□□□ 1.77
TTC28-204ENST00000468807 SAMD1Q6SPF0 538 aaPredicted RBP26.13■■□□□ 1.77
TTC28-204ENST00000468807 SPICE1Q8N0Z3 855 aa26.13■■□□□ 1.77
TTC28-204ENST00000468807 STK11IPQ8N1F8 1099 aa26.13■■□□□ 1.77
TTC28-204ENST00000468807 APPBP2Q92624 585 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms