RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ZMYM6O95789 1325 aa17.62■□□□□ 0.41
TMEM39A-205ENST00000468676 LOC285556D6RIA3 1793 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 FOXP2O15409 715 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 GUCY1A2P33402 732 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 PPARAQ07869 468 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 VPS53Q5VIR6 699 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 ZNF589Q86UQ0 364 aaPredicted RBP17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 ZNF444Q8N0Y2 327 aaPredicted RBP17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 FEZ1Q99689 392 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 KIAA1683Q9H0B3 1180 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 SH2D4AQ9H788 454 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 PPP4R2Q9NY27 417 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 ANAPC4Q9UJX5 808 aa17.61■□□□□ 0.41
TMEM39A-205ENST00000468676 SMIM22K7EJ46 135 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 FGAP02671 866 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 AKR1B1P15121 316 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 SP3Q02447 781 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 ARHGEF6Q15052 776 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 ERO1AQ96HE7 468 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 KANSL2Q9H9L4 492 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 ARHGEF10LQ9HCE6 1279 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 RAD50Q92878 1312 aa17.6■□□□□ 0.41
TMEM39A-205ENST00000468676 RASA1P20936 1047 aa17.59■□□□□ 0.41
TMEM39A-205ENST00000468676 OSBPP22059 807 aa17.59■□□□□ 0.41
TMEM39A-205ENST00000468676 HOXA7P31268 230 aaPredicted RBP17.59■□□□□ 0.41
TMEM39A-205ENST00000468676 C12orf42Q96LP6 360 aa17.59■□□□□ 0.41
TMEM39A-205ENST00000468676 CHMLP26374 656 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 ICA1Q05084 483 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 BMP2KLQ5H9B9 411 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 TREML2Q5T2D2 321 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 C17orf99Q6UX52 265 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 CTU1Q7Z7A3 348 aaKnown RBP17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 ACER1Q8TDN7 264 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 SMCR8Q8TEV9 937 aaPredicted RBP17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 EMILIN3Q9NT22 766 aa17.58■□□□□ 0.4
TMEM39A-205ENST00000468676 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
TMEM39A-205ENST00000468676 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
TMEM39A-205ENST00000468676 KIF22Q14807 665 aa17.57■□□□□ 0.4
TMEM39A-205ENST00000468676 PPP4R3BQ5MIZ7 849 aa17.57■□□□□ 0.4
TMEM39A-205ENST00000468676 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
TMEM39A-205ENST00000468676 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
TMEM39A-205ENST00000468676 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
TMEM39A-205ENST00000468676 CYP2C8P10632 490 aa17.56■□□□□ 0.4
TMEM39A-205ENST00000468676 IRX3P78415 501 aaPredicted RBP17.56■□□□□ 0.4
TMEM39A-205ENST00000468676 LPAR1Q92633 364 aa17.56■□□□□ 0.4
TMEM39A-205ENST00000468676 ASCC2Q9H1I8 757 aaPredicted RBP17.56■□□□□ 0.4
TMEM39A-205ENST00000468676 TMX2Q9Y320 296 aa17.56■□□□□ 0.4
TMEM39A-205ENST00000468676 A0A1W2PRG0 241 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L15C9J2P7 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L13C9JLJ4 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L11C9JVI0 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L18D6R9N7 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L22D6RA61 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L17D6RBQ6 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L19D6RCP7 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L20D6RJB6 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 ORC4O43929 436 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 PRDM1O75626 825 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 FGRP09769 529 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 NT5C2P49902 561 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 USP17L24Q0WX57 530 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 DGKZQ13574 1117 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 ZYXQ15942 572 aaKnown RBP17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 SIAH1Q8IUQ4 282 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 NYAP2Q9P242 653 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 CPA4Q9UI42 421 aa17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 GREB1LQ9C091 1923 aaPredicted RBP17.55■□□□□ 0.4
TMEM39A-205ENST00000468676 ZNF213O14771 459 aa17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 GNRH1P01148 92 aa17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 BCRP11274 1271 aa17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 EEF2P13639 858 aaKnown RBP17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 LACTBP83111 547 aaPredicted RBP17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
TMEM39A-205ENST00000468676 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 IGKV6D-41A0A0C4DH26 115 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 SGSM2O43147 1006 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 VCAM1P19320 739 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 TFAP4Q01664 338 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 MCOLN1Q9GZU1 580 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 VCPKMTQ9H867 229 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 EFCC1Q9HA90 598 aa17.53■□□□□ 0.4
TMEM39A-205ENST00000468676 TSPY2A6NKD2 308 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 TTLL1O95922 423 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 HERVK_113P62684 666 aa17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
TMEM39A-205ENST00000468676 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms