RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 MPHOSPH10O00566 681 aaKnown RBP4.32□□□□□ -1.72
COMMD3-207ENST00000468469 IRF6O14896 467 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 FOXP2O15409 715 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 ALDH1A1P00352 501 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 GH2P01242 217 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
COMMD3-207ENST00000468469 HSPD1P10809 573 aaKnown RBP4.32□□□□□ -1.72
COMMD3-207ENST00000468469 PPARAQ07869 468 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 MTMR2Q13614 643 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 RRP1BQ14684 758 aaKnown RBP4.32□□□□□ -1.72
COMMD3-207ENST00000468469 RAB3GAP1Q15042 981 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 CCL15Q16663 113 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 ABCB5Q2M3G0 1257 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 SHROOM1Q2M3G4 852 aaPredicted RBP4.32□□□□□ -1.72
COMMD3-207ENST00000468469 CERKLQ49MI3 558 aaPredicted RBP4.32□□□□□ -1.72
COMMD3-207ENST00000468469 SBK1Q52WX2 424 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 C12orf60Q5U649 245 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 VPS53Q5VIR6 699 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 OTUD7BQ6GQQ9 843 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 TATDN1Q6P1N9 297 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 CASC1Q6TDU7 716 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 TMEM179Q6ZVK1 233 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 C16orf86Q6ZW13 317 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 STK11IPQ8N1F8 1099 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 RUFY2Q8WXA3 655 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 BRI3BPQ8WY22 251 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 DYNLL2Q96FJ2 89 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 FEZ1Q99689 392 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 TBC1D2Q9BYX2 928 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 ZNF287Q9HBT7 754 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 CABP5Q9NP86 173 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 GINM1Q9NU53 330 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 WBP1LQ9NX94 342 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 SAGE1Q9NXZ1 904 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 KCNH4Q9UQ05 1017 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 ZHX2Q9Y6X8 837 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 MYH1P12882 1939 aa4.32□□□□□ -1.72
COMMD3-207ENST00000468469 PLIN4Q96Q06 1357 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 LAMA4Q16363 1823 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 A0A0G2JLL6 359 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 TESPA1A2RU30 521 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 BTBD19C9JJ37 291 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 USP17L10C9JJH3 530 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 SMIM22K7EJ46 135 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 IGF2BP3O00425 579 aaKnown RBP eCLIP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 CXCL11O14625 94 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 FOXN1O15353 648 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 CDC45O75419 566 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 PRDM1O75626 825 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 TRPA1O75762 1119 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 HSPA8P11142 646 aaKnown RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 AKR1B1P15121 316 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 CHMLP26374 656 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 TM4SF4P48230 202 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 CDK8P49336 464 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 CTCFP49711 727 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 HMGCS2P54868 508 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 INHBEP58166 350 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 JAG1P78504 1218 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 ICA1Q05084 483 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 PDE4BQ07343 736 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 SEPT2Q15019 361 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 TAF1CQ15572 869 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 ZYXQ15942 572 aaKnown RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 VARS2Q5ST30 1063 aaKnown RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 GADL1Q6ZQY3 521 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 FASTKD5Q7L8L6 764 aaKnown RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 PRRT2Q7Z6L0 340 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 PROCA1Q8NCQ7 364 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 ZNF280CQ8ND82 737 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 MS4A4AQ96JQ5 239 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 CCDC17Q96LX7 622 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 PARK7Q99497 189 aaKnown RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 DSCC1Q9BVC3 393 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 IL25Q9H293 177 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 MKNK2Q9HBH9 465 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 ARHGEF10LQ9HCE6 1279 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 RNF186Q9NXI6 227 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 TMOD4Q9NZQ9 345 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 TSKSQ9UJT2 592 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 AGTPBP1Q9UPW5 1226 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
COMMD3-207ENST00000468469 POLR2AP24928 1970 aaKnown RBP4.31□□□□□ -1.72
COMMD3-207ENST00000468469 PHIPQ8WWQ0 1821 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 NEDD4P46934 1319 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 TSPY2A6NKD2 308 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 C19orf81C9J6K1 198 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 PDHXO00330 501 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 SGSM2O43147 1006 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 TBC1D8O95759 1140 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 TSPY3P0CV98 308 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 TSPY8P0CW00 308 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 RASA1P20936 1047 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 USP14P54578 494 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 BACE1P56817 501 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 HAND2P61296 217 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 CTDSPL2Q05D32 466 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 SPP2Q13103 211 aa4.3□□□□□ -1.72
COMMD3-207ENST00000468469 PABPC4Q13310 644 aaKnown RBP eCLIP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms