RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.5
ATG4B-215ENST00000468018 SEPT2Q15019 361 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 RAB3GAP1Q15042 981 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 ARHGEF6Q15052 776 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 FAM110CQ1W6H9 321 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 AMOTL1Q8IY63 956 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 KIAA1683Q9H0B3 1180 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 ASCC2Q9H1I8 757 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-215ENST00000468018 PLXNB2O15031 1838 aa18.18■□□□□ 0.5
ATG4B-215ENST00000468018 KIAA0100Q14667 2235 aaKnown RBP18.18■□□□□ 0.5
ATG4B-215ENST00000468018 AKR1B1P15121 316 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 ACER1Q8TDN7 264 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 TRIM47Q96LD4 638 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 CCDC17Q96LX7 622 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 A0A0G2JMZ2 1700 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 BRCA2P51587 3418 aa18.17■□□□□ 0.5
ATG4B-215ENST00000468018 A0A1W2PRG0 241 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 OSBPP22059 807 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 GCLCP48506 637 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-215ENST00000468018 USP14P54578 494 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 PRMT2P55345 433 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 KIF22Q14807 665 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 SIAH1Q8IUQ4 282 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 SMCR8Q8TEV9 937 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-215ENST00000468018 ARMC5Q96C12 935 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 HELLSQ9NRZ9 838 aa18.16■□□□□ 0.5
ATG4B-215ENST00000468018 PSMC4P43686 418 aa18.15■□□□□ 0.5
ATG4B-215ENST00000468018 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG4B-215ENST00000468018 PTCH2Q9Y6C5 1203 aa18.15■□□□□ 0.5
ATG4B-215ENST00000468018 PDE4AP27815 886 aa18.14■□□□□ 0.49
ATG4B-215ENST00000468018 POTEEQ6S8J3 1075 aa18.14■□□□□ 0.49
ATG4B-215ENST00000468018 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
ATG4B-215ENST00000468018 ANKRD13CQ8N6S4 541 aa18.14■□□□□ 0.49
ATG4B-215ENST00000468018 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.49
ATG4B-215ENST00000468018 SRRDQ9UH36 339 aa18.14■□□□□ 0.49
ATG4B-215ENST00000468018 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 VCAM1P19320 739 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 RASA1P20936 1047 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 FAM227BQ96M60 508 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 P2RX7Q99572 595 aaKnown RBP18.13■□□□□ 0.49
ATG4B-215ENST00000468018 FEZ1Q99689 392 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
ATG4B-215ENST00000468018 COL11A1P12107 1806 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-215ENST00000468018 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
ATG4B-215ENST00000468018 TDO2P48775 406 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 FCGRTP55899 365 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 HERVK_113P62684 666 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 IRX3P78415 501 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-215ENST00000468018 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 CLEC10AQ8IUN9 316 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 NACAP1Q9BZK3 213 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 TXNRD2Q9NNW7 524 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 TMX2Q9Y320 296 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 PLIN4Q96Q06 1357 aa18.12■□□□□ 0.49
ATG4B-215ENST00000468018 MINDY4BA8MYZ0 360 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L15C9J2P7 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L13C9JLJ4 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L11C9JVI0 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L18D6R9N7 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L22D6RA61 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L17D6RBQ6 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L19D6RCP7 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L20D6RJB6 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 HOXD10P28358 340 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 ICA1Q05084 483 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 USP17L24Q0WX57 530 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 ALX1Q15699 326 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 ZYXQ15942 572 aaKnown RBP18.11■□□□□ 0.49
ATG4B-215ENST00000468018 MCMDC2Q4G0Z9 681 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 KIAA1755Q5JYT7 1200 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 GTF3C2Q8WUA4 911 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-215ENST00000468018 ZNF333Q96JL9 665 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 NAPBQ9H115 298 aa18.11■□□□□ 0.49
ATG4B-215ENST00000468018 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 MYPNQ86TC9 1320 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 IGKV6D-41A0A0C4DH26 115 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 TRIM6-TRIM34B2RNG4 842 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 FMNL1O95466 1100 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-215ENST00000468018 APPP05067 770 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 SDSP20132 328 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 PPARAQ07869 468 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 NMIQ13287 307 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-215ENST00000468018 ZNF589Q86UQ0 364 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-215ENST00000468018 LPAR1Q92633 364 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 VCPKMTQ9H867 229 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 KANSL2Q9H9L4 492 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 RBPJLQ9UBG7 517 aa18.1■□□□□ 0.49
ATG4B-215ENST00000468018 EEF2P13639 858 aaKnown RBP18.09■□□□□ 0.49
ATG4B-215ENST00000468018 PRKCZQ05513 592 aa18.09■□□□□ 0.49
ATG4B-215ENST00000468018 RILPL2Q969X0 211 aa18.09■□□□□ 0.49
ATG4B-215ENST00000468018 ARHGEF10LQ9HCE6 1279 aa18.09■□□□□ 0.49
ATG4B-215ENST00000468018 ANAPC4Q9UJX5 808 aa18.09■□□□□ 0.49
ATG4B-215ENST00000468018 GABRQQ9UN88 632 aa18.09■□□□□ 0.49
ATG4B-215ENST00000468018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms