RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.29
PRPF3-203ENST00000467514 GJD2Q9UKL4 321 aa13.21□□□□□ -0.29
PRPF3-203ENST00000467514 EYSQ5T1H1 3165 aa13.21□□□□□ -0.3
PRPF3-203ENST00000467514 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.3
PRPF3-203ENST00000467514 RFX7Q2KHR2 1363 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 CNGA1P29973 690 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 MAPK4P31152 587 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 PHKA1P46020 1223 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
PRPF3-203ENST00000467514 CACNB2Q08289 660 aaPredicted RBP13.2□□□□□ -0.3
PRPF3-203ENST00000467514 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 CASC1Q6TDU7 716 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
PRPF3-203ENST00000467514 NEUROD6Q96NK8 337 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
PRPF3-203ENST00000467514 VCANP13611 3396 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 MAST2Q6P0Q8 1798 aa13.2□□□□□ -0.3
PRPF3-203ENST00000467514 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 GAKO14976 1311 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
PRPF3-203ENST00000467514 FOSL2P15408 326 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 CCND3P30281 292 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-203ENST00000467514 MTMR2Q13614 643 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 MAP3K21Q5TCX8 1036 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-203ENST00000467514 APBA2Q99767 749 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
PRPF3-203ENST00000467514 USP26Q9BXU7 913 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 IL25Q9H293 177 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 PRDM5Q9NQX1 630 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-203ENST00000467514 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
PRPF3-203ENST00000467514 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
PRPF3-203ENST00000467514 COL6A1P12109 1028 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 ANP32AP39687 249 aaKnown RBP13.18□□□□□ -0.3
PRPF3-203ENST00000467514 HERVK_113P62684 666 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 MFSD14CQ5VZR4 134 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 MYLIPQ8WY64 445 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 EDC3Q96F86 508 aaKnown RBP13.18□□□□□ -0.3
PRPF3-203ENST00000467514 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
PRPF3-203ENST00000467514 SGSM2O43147 1006 aa13.17□□□□□ -0.3
PRPF3-203ENST00000467514 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
PRPF3-203ENST00000467514 TBC1D12O60347 775 aa13.17□□□□□ -0.3
PRPF3-203ENST00000467514 CAP2P40123 477 aa13.17□□□□□ -0.3
PRPF3-203ENST00000467514 GSTO1P78417 241 aa13.17□□□□□ -0.3
PRPF3-203ENST00000467514 CCL14Q16627 93 aa13.17□□□□□ -0.3
PRPF3-203ENST00000467514 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
PRPF3-203ENST00000467514 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
PRPF3-203ENST00000467514 P2RX7Q99572 595 aaKnown RBP13.17□□□□□ -0.3
PRPF3-203ENST00000467514 PRUNE2Q8WUY3 3088 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 ZBTB22O15209 634 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 PEX10O60683 326 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 REC8O95072 547 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 LDHCP07864 332 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-203ENST00000467514 RTP1P59025 263 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 ERVK-24P63145 666 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 GPR142Q7Z601 462 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 GTF3C2Q8WUA4 911 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-203ENST00000467514 KIF2CQ99661 725 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 IVNS1ABPQ9Y6Y0 642 aa13.16□□□□□ -0.3
PRPF3-203ENST00000467514 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-203ENST00000467514 HIP1O00291 1037 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 MSCO60682 206 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 ASNSP08243 561 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 COL9A1P20849 921 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 BACE1P56817 501 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 CCNA1P78396 465 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 MECOMQ03112 1051 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 RASGRF1Q13972 1273 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 SH3D19Q5HYK7 790 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.3
PRPF3-203ENST00000467514 NDUFB9Q9Y6M9 179 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
PRPF3-203ENST00000467514 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 KBTBD13C9JR72 458 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 MCAMP43121 646 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 ATP2B2Q01814 1243 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 TTC39AQ5SRH9 613 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 LHX8Q68G74 356 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
PRPF3-203ENST00000467514 IPO9Q96P70 1041 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms