RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 HAUS4Q9H6D7 363 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
CHD1L-205ENST00000467213 CDHR2Q9BYE9 1310 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 TCRBV5S4A2TA0A5A2 114 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 EIF3CLB5ME19 914 aaKnown RBP17.61■□□□□ 0.41
CHD1L-205ENST00000467213 CASP14P31944 242 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 RAB11FIP4Q86YS3 637 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 EIF3CQ99613 913 aaKnown RBP17.61■□□□□ 0.41
CHD1L-205ENST00000467213 MYH3P11055 1940 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
CHD1L-205ENST00000467213 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
CHD1L-205ENST00000467213 PAPD7Q5XG87 772 aaKnown RBP17.61■□□□□ 0.41
CHD1L-205ENST00000467213 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 SUGP1Q8IWZ8 645 aaKnown RBP17.61■□□□□ 0.41
CHD1L-205ENST00000467213 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
CHD1L-205ENST00000467213 B4E1Z4 1266 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
CHD1L-205ENST00000467213 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 CRACR2BQ8N4Y2 399 aaPredicted RBP17.6■□□□□ 0.41
CHD1L-205ENST00000467213 PAGE5Q96GU1 130 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 STRBPQ96SI9 672 aaKnown RBP17.6■□□□□ 0.41
CHD1L-205ENST00000467213 RWDD2AQ9UIY3 292 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 RIPOR2Q9Y4F9 1068 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 LRP5O75197 1615 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 MCAMP43121 646 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 CKAP4Q07065 602 aaKnown RBP17.6■□□□□ 0.41
CHD1L-205ENST00000467213 AFAP1L1Q8TED9 768 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
CHD1L-205ENST00000467213 A6NNZ2 444 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 LRRIQ3A6PVS8 624 aaPredicted RBP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 ERVV-2B6SEH9 535 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 UQCRFS1P1P0C7P4 283 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 EIF5P55010 431 aaKnown RBP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 ERVK-24P63145 666 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 GRIN1Q05586 938 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 TCIRG1Q13488 830 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 TUBB8Q3ZCM7 444 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 RNF26Q9BY78 433 aaPredicted RBP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 PCDHB6Q9Y5E3 794 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 N4BP1O75113 896 aaKnown RBP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 SYF2O95926 243 aaKnown RBP17.59■□□□□ 0.41
CHD1L-205ENST00000467213 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 ANKRD20A12PQ8NF67 263 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 STAG1Q8WVM7 1258 aa17.59■□□□□ 0.41
CHD1L-205ENST00000467213 CD44P16070 742 aaKnown RBP17.58■□□□□ 0.41
CHD1L-205ENST00000467213 ITIH3Q06033 890 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.41
CHD1L-205ENST00000467213 RTN1Q16799 776 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 ZNF827Q17R98 1081 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 SENP2Q9HC62 589 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 MYH2Q9UKX2 1941 aa17.58■□□□□ 0.41
CHD1L-205ENST00000467213 A0A1W2PQC6 194 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 DNAJC21Q5F1R6 531 aaKnown RBP17.58■□□□□ 0.4
CHD1L-205ENST00000467213 COG1Q8WTW3 980 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 CCDC102AQ96A19 550 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 SEC31BQ9NQW1 1179 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
CHD1L-205ENST00000467213 ZSWIM5Q9P217 1185 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 HPCAL4Q9UM19 191 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.4
CHD1L-205ENST00000467213 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
CHD1L-205ENST00000467213 ANO9A1A5B4 782 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 TRIM75PA6NK02 468 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 IFIT3O14879 490 aaKnown RBP17.57■□□□□ 0.4
CHD1L-205ENST00000467213 CLSTN1O94985 981 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 ATXN2Q99700 1313 aaKnown RBP17.57■□□□□ 0.4
CHD1L-205ENST00000467213 RNF40O75150 1001 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 XBP1P17861 261 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 GNAT2P19087 354 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 IFIT5Q13325 482 aaKnown RBP17.57■□□□□ 0.4
CHD1L-205ENST00000467213 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 ANKRD36CQ5JPF3 1778 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 RHOXF2BP0C7M4 288 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 PDE6AP16499 860 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 KRT31Q15323 416 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 ZNF572Q7Z3I7 529 aaPredicted RBP17.57■□□□□ 0.4
CHD1L-205ENST00000467213 NKX2-3Q8TAU0 364 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
CHD1L-205ENST00000467213 DNAJC7Q99615 494 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 RHOXF2Q9BQY4 288 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 DENND2AQ9ULE3 1009 aa17.57■□□□□ 0.4
CHD1L-205ENST00000467213 PLCH1Q4KWH8 1693 aa17.56■□□□□ 0.4
CHD1L-205ENST00000467213 GUCY2CP25092 1073 aa17.56■□□□□ 0.4
CHD1L-205ENST00000467213 GBP6Q6ZN66 633 aa17.56■□□□□ 0.4
CHD1L-205ENST00000467213 ZBTB38Q8NAP3 1195 aaPredicted RBP17.56■□□□□ 0.4
CHD1L-205ENST00000467213 NOA1Q8NC60 698 aaKnown RBP17.56■□□□□ 0.4
CHD1L-205ENST00000467213 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
CHD1L-205ENST00000467213 EPN1Q9Y6I3 576 aaPredicted RBP17.56■□□□□ 0.4
CHD1L-205ENST00000467213 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms