RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CHRNDQ07001 517 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 NTRK3Q16288 839 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 FAM177A1Q8N128 213 aaPredicted RBP20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 KIAA1468Q9P260 1216 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 KCNJ14Q9UNX9 436 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 SLC12A7Q9Y666 1083 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
SNAPC3-205ENST00000467062 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 EGFL6Q8IUX8 553 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 PPP2R2CQ9Y2T4 447 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 MINDY4BA8MYZ0 360 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 IGHMBP2P38935 993 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 SETQ01105 290 aaPredicted RBP20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 RAB21Q9UL25 225 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 L1RE1Q9UN81 338 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 LRP6O75581 1613 aa20.47■□□□□ 0.87
SNAPC3-205ENST00000467062 A0A1W2PQ27 194 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 A0A1W2PQ64 194 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 A0A1W2PQD8 194 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 ARHGAP6O43182 974 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 N4BP1O75113 896 aaKnown RBP20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 YEATS4O95619 227 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 HNRNPH1P31943 449 aaKnown RBP20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 CCDC102AQ96A19 550 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 SLC3A2P08195 630 aaKnown RBP20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 NUP133Q8WUM0 1156 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 WDR24Q96S15 920 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 GBP3Q9H0R5 595 aa20.46■□□□□ 0.87
SNAPC3-205ENST00000467062 CCDC189A1A4V9 331 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 CHMP4BP1P59074 171 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 AKNAD1Q5T1N1 836 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 BTBD18B2RXH4 712 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 CBFA2T2O43439 604 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 NTSR2O95665 410 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 PTPN21Q16825 1174 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 SHC4Q6S5L8 630 aa20.45■□□□□ 0.86
SNAPC3-205ENST00000467062 CYP2D7A0A087X1C5 515 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 hCG_1642624A0A1W2PR95 340 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 CALRP27797 417 aaKnown RBP20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 SRGAP1Q7Z6B7 1085 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 TMEM87BQ96K49 555 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 FANCCQ00597 558 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 CPLX2Q6PUV4 134 aaKnown RBP20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 MSANTD4Q8NCY6 345 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 FAM204AQ9H8W3 233 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
SNAPC3-205ENST00000467062 CYP7A1P22680 504 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 STAG1Q8WVM7 1258 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 KIFC2Q96AC6 838 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 DHX58Q96C10 678 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 NUP98P52948 1817 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 PRDM1O75626 825 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 EVX2Q03828 476 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 PNOCQ13519 176 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 ERFEQ4G0M1 354 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 PTF1AQ7RTS3 328 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 CEP112Q8N8E3 955 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 ATRNO75882 1429 aa20.43■□□□□ 0.86
SNAPC3-205ENST00000467062 PPP1R12AO14974 1030 aaPredicted RBP20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 CDKL5O76039 1030 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 TUBBP07437 444 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 CMA1P23946 247 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 GRIN1Q05586 938 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 TRIM29Q14134 588 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 LRCH2Q5VUJ6 765 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 KAT2BQ92831 832 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 ANKZF1Q9H8Y5 726 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 A1CFQ9NQ94 594 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 SYKP43405 635 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 CASP8Q14790 479 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 PTPAQ15257 358 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 SGMS1Q86VZ5 419 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 AFAP1L1Q8TED9 768 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 PLEKHA4Q9H4M7 779 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 ABCB6Q9NP58 842 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 SPATA31A1Q5TZJ5 1347 aa20.42■□□□□ 0.86
SNAPC3-205ENST00000467062 FOXN1O15353 648 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 LMOD1P29536 600 aaPredicted RBP20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 NR5A1Q13285 461 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 HSP90AA4PQ58FG1 418 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 POTEDQ86YR6 584 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 GIMAP7Q8NHV1 300 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 JAG2Q9Y219 1238 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 LIG3P49916 1009 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 DYNLL1P63167 89 aaKnown RBP20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 ALX1Q15699 326 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 GBP6Q6ZN66 633 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 FAM212AQ96EL1 285 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 ATP1A3P13637 1013 aa20.41■□□□□ 0.86
SNAPC3-205ENST00000467062 COL4A1P02462 1669 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms