RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 FAM84BQ96KN1 310 aaPredicted RBP8.42□□□□□ -1.06
CLDN4-204ENST00000466411 TTC41PQ6P2S7 1318 aa8.42□□□□□ -1.06
CLDN4-204ENST00000466411 DOCK2Q92608 1830 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 GPR37O15354 613 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 MYO1BO43795 1136 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 MAP4K4O95819 1239 aaPredicted RBP8.41□□□□□ -1.06
CLDN4-204ENST00000466411 GYG1P46976 350 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 GTF2IP78347 998 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 TRIM32Q13049 653 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 TMEM31Q5JXX7 168 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 POTEEQ6S8J3 1075 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 AACSQ86V21 672 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 MRIQ9BWK5 157 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 THEGQ9P2T0 379 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 PCDHB15Q9Y5E8 787 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 MYH7P12883 1935 aa8.41□□□□□ -1.06
CLDN4-204ENST00000466411 USP34Q70CQ2 3546 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 ZDBF2Q9HCK1 2354 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 TBC1D12O60347 775 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 KLRK1P26718 216 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 GSTO1P78417 241 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 AKNAD1Q5T1N1 836 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 MAP3K21Q5TCX8 1036 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 CENPQQ7L2Z9 268 aaPredicted RBP8.4□□□□□ -1.06
CLDN4-204ENST00000466411 DDX12PQ92771 950 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 KHSRPQ92945 711 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLDN4-204ENST00000466411 ZKSCAN4Q969J2 545 aaPredicted RBP8.4□□□□□ -1.06
CLDN4-204ENST00000466411 VEZTQ9HBM0 779 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 CSADQ9Y600 493 aa8.4□□□□□ -1.06
CLDN4-204ENST00000466411 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.07
CLDN4-204ENST00000466411 AK9Q5TCS8 1911 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 PLXNB2O15031 1838 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 LDHBP07195 334 aaKnown RBP8.39□□□□□ -1.07
CLDN4-204ENST00000466411 CYP2C8P10632 490 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 TIMM10P62072 90 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 PPATQ06203 517 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 ZSCAN25Q6NSZ9 544 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 SPATA5Q8NB90 893 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 FBXW7Q969H0 707 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
CLDN4-204ENST00000466411 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLDN4-204ENST00000466411 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 ECHDC1Q9NTX5 307 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
CLDN4-204ENST00000466411 GJD2Q9UKL4 321 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
CLDN4-204ENST00000466411 GLRX3O76003 335 aaKnown RBP8.38□□□□□ -1.07
CLDN4-204ENST00000466411 LDHCP07864 332 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 ATP5JP18859 108 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 MX1P20591 662 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 PHKA1P46020 1223 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 NHLH1Q02575 133 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 TNFAIP1Q13829 316 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 RASGRF1Q13972 1273 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 LHX8Q68G74 356 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 DZIP1Q86YF9 867 aaKnown RBP8.38□□□□□ -1.07
CLDN4-204ENST00000466411 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 EAF2Q96CJ1 260 aaPredicted RBP8.38□□□□□ -1.07
CLDN4-204ENST00000466411 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
CLDN4-204ENST00000466411 IL1RAPL2Q9NP60 686 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 ZNF70Q9UC06 446 aaPredicted RBP8.38□□□□□ -1.07
CLDN4-204ENST00000466411 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
CLDN4-204ENST00000466411 MYH2Q9UKX2 1941 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 APBB1O00213 710 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 HMGCRP04035 888 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 NUCB1Q02818 461 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 ANKRD45Q5TZF3 282 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 HHIPL2Q6UWX4 724 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 CHD1LQ86WJ1 897 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 LBHD1Q9BQE6 289 aaPredicted RBP8.37□□□□□ -1.07
CLDN4-204ENST00000466411 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 TMOD2Q9NZR1 351 aa8.37□□□□□ -1.07
CLDN4-204ENST00000466411 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
CLDN4-204ENST00000466411 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 RFX7Q2KHR2 1363 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 CACNA1BQ00975 2339 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 SNAP23O00161 211 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 BAG3O95817 575 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 ZFYP08048 801 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 HOXB3P14651 431 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 ADORA1P30542 326 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 MCAMP43121 646 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 TNNI2P48788 182 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 CHAF1AQ13111 956 aaPredicted RBP8.36□□□□□ -1.07
CLDN4-204ENST00000466411 ADGRE1Q14246 886 aa8.36□□□□□ -1.07
CLDN4-204ENST00000466411 FKBP1CQ5VVH2 108 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms