RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SPECC1LQ69YQ0 1117 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 AATFQ9NY61 560 aaKnown RBP eCLIP22.11■■□□□ 1.13
LIMS2-212ENST00000466410 LAMB2P55268 1798 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 XBP1P17861 261 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 ADKP55263 362 aaKnown RBP22.11■■□□□ 1.13
LIMS2-212ENST00000466410 FCHSD1Q86WN1 690 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 ANKRD18AQ8IVF6 992 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 TC2NQ8N9U0 490 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 BAG1Q99933 345 aaPredicted RBP22.11■■□□□ 1.13
LIMS2-212ENST00000466410 PPP2R2CQ9Y2T4 447 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 PRPF3O43395 683 aaKnown RBP22.1■■□□□ 1.13
LIMS2-212ENST00000466410 KRT2P35908 639 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 ERFEQ4G0M1 354 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 NOM1Q5C9Z4 860 aaKnown RBP22.1■■□□□ 1.13
LIMS2-212ENST00000466410 CATIPQ7Z7H3 387 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 VWA3AA6NCI4 1184 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 IGSF3O75054 1194 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 CASP1P29466 404 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 AFMP43652 599 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 PLCD1P51178 756 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 MARCH10Q8NA82 808 aaPredicted RBP22.1■■□□□ 1.13
LIMS2-212ENST00000466410 DUOX1Q9NRD9 1551 aa22.1■■□□□ 1.13
LIMS2-212ENST00000466410 EVX2Q03828 476 aa22.09■■□□□ 1.13
LIMS2-212ENST00000466410 TROAPQ12815 778 aa22.09■■□□□ 1.13
LIMS2-212ENST00000466410 BAZ2BQ9UIF8 2168 aaKnown RBP22.09■■□□□ 1.13
LIMS2-212ENST00000466410 ZSCAN12O43309 604 aa22.09■■□□□ 1.13
LIMS2-212ENST00000466410 PIP4K2BP78356 416 aa22.09■■□□□ 1.13
LIMS2-212ENST00000466410 UBE4AQ14139 1066 aa22.09■■□□□ 1.13
LIMS2-212ENST00000466410 NOL10Q9BSC4 688 aaKnown RBP22.09■■□□□ 1.13
LIMS2-212ENST00000466410 ZNF446Q9NWS9 450 aa22.09■■□□□ 1.13
LIMS2-212ENST00000466410 ZHX1Q9UKY1 873 aaPredicted RBP22.09■■□□□ 1.13
LIMS2-212ENST00000466410 FAM177A1Q8N128 213 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-212ENST00000466410 SYMPKQ92797 1274 aaKnown RBP22.08■■□□□ 1.13
LIMS2-212ENST00000466410 FAM84BQ96KN1 310 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-212ENST00000466410 BRIP1Q9BX63 1249 aa22.08■■□□□ 1.13
LIMS2-212ENST00000466410 RREB1Q92766 1687 aa22.08■■□□□ 1.13
LIMS2-212ENST00000466410 URI1O94763 535 aaPredicted RBP22.08■■□□□ 1.12
LIMS2-212ENST00000466410 H2AFXP16104 143 aaPredicted RBP22.08■■□□□ 1.12
LIMS2-212ENST00000466410 ERCC5P28715 1186 aaPredicted RBP22.08■■□□□ 1.12
LIMS2-212ENST00000466410 CAVIN4Q5BKX8 364 aa22.08■■□□□ 1.12
LIMS2-212ENST00000466410 CTR9Q6PD62 1173 aa22.08■■□□□ 1.12
LIMS2-212ENST00000466410 IQCA1Q86XH1 822 aa22.08■■□□□ 1.12
LIMS2-212ENST00000466410 NR1I3Q14994 352 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 NPY5RQ15761 445 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 TOGARAM2Q6ZUX3 1019 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 MINPP1Q9UNW1 487 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 USP17L12C9JPN9 530 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 USP17L21D6R901 530 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 STX10O60499 249 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 SLFN14P0C7P3 912 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 CD44P16070 742 aaKnown RBP22.07■■□□□ 1.12
LIMS2-212ENST00000466410 ZNF174Q15697 407 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 KLHL10Q6JEL2 608 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 PAGE5Q96GU1 130 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 BSDC1Q9NW68 430 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-212ENST00000466410 ZNF652Q9Y2D9 606 aa22.07■■□□□ 1.12
LIMS2-212ENST00000466410 FGRP09769 529 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 SH3RF1Q7Z6J0 888 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 CDCA7Q9BWT1 371 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-212ENST00000466410 RBM28Q9NW13 759 aaKnown RBP22.06■■□□□ 1.12
LIMS2-212ENST00000466410 PARP3Q9Y6F1 533 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 STX17P56962 302 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 ARHGAP29Q52LW3 1261 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 TNFRSF25Q93038 417 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 FAM53CQ9NYF3 392 aa22.06■■□□□ 1.12
LIMS2-212ENST00000466410 A0A1B0GTH6 734 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 NMT2O60551 498 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 SF3B3Q15393 1217 aaKnown RBP22.05■■□□□ 1.12
LIMS2-212ENST00000466410 TMTC3Q6ZXV5 915 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 KRT222Q8N1A0 295 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 A0A1B0GUL6 1792 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 TEX33O43247 280 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 KLRK1P26718 216 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 APTXQ7Z2E3 356 aaKnown RBP22.05■■□□□ 1.12
LIMS2-212ENST00000466410 CELF1Q92879 486 aaKnown RBP22.05■■□□□ 1.12
LIMS2-212ENST00000466410 WDR24Q96S15 920 aa22.05■■□□□ 1.12
LIMS2-212ENST00000466410 CUL4BQ13620 913 aa22.04■■□□□ 1.12
LIMS2-212ENST00000466410 SMYD4Q8IYR2 804 aaPredicted RBP22.04■■□□□ 1.12
LIMS2-212ENST00000466410 SRBD1Q8N5C6 995 aaKnown RBP22.04■■□□□ 1.12
LIMS2-212ENST00000466410 FERMT2Q96AC1 680 aa22.04■■□□□ 1.12
LIMS2-212ENST00000466410 KCNQ2O43526 872 aa22.04■■□□□ 1.12
LIMS2-212ENST00000466410 CARD6Q9BX69 1037 aa22.04■■□□□ 1.12
LIMS2-212ENST00000466410 CNTNAP5Q8WYK1 1306 aa22.04■■□□□ 1.12
LIMS2-212ENST00000466410 CALM1P0DP23 149 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 CALM2P0DP24 149 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 CALM3P0DP25 149 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 DPYDQ12882 1025 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 TTC38Q5R3I4 469 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 SPATA1Q5VX52 437 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 BICDL1Q6ZP65 573 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 CCDC34Q96HJ3 373 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 DESI2Q9BSY9 194 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 BRMS1Q9HCU9 246 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.03■■□□□ 1.12
LIMS2-212ENST00000466410 DDAH1O94760 285 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 CLCN6P51797 869 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 GNG11P61952 73 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 PTGDRQ13258 359 aa22.03■■□□□ 1.12
LIMS2-212ENST00000466410 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms