RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 FKTNO75072 461 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
ATG3-203ENST00000465980 RASGRF1Q13972 1273 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 CDC42EP5Q6NZY7 148 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.5□□□□□ -0.57
ATG3-203ENST00000465980 SNIP1Q8TAD8 396 aaKnown RBP11.5□□□□□ -0.57
ATG3-203ENST00000465980 XAGE2Q96GT9 111 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
ATG3-203ENST00000465980 ABCF2Q9UG63 623 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 DACH1Q9UI36 760 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 CDK5RAP2Q96SN8 1893 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 BRCA2P51587 3418 aa11.5□□□□□ -0.57
ATG3-203ENST00000465980 PTPRFP10586 1907 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
ATG3-203ENST00000465980 ALDH1A1P00352 501 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 INHBEP58166 350 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 NUCB1Q02818 461 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 MLLT1Q03111 559 aaPredicted RBP11.49□□□□□ -0.57
ATG3-203ENST00000465980 NFIAQ12857 509 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 CRHR2Q13324 411 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 GORABQ5T7V8 394 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 FKBP1CQ5VVH2 108 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 MIGA2Q7L4E1 593 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 FAM83AQ86UY5 434 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 DZIP1Q86YF9 867 aaKnown RBP11.49□□□□□ -0.57
ATG3-203ENST00000465980 ZKSCAN4Q969J2 545 aaPredicted RBP11.49□□□□□ -0.57
ATG3-203ENST00000465980 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 RPAP1Q9BWH6 1393 aaPredicted RBP11.49□□□□□ -0.57
ATG3-203ENST00000465980 ATAD5Q96QE3 1844 aa11.49□□□□□ -0.57
ATG3-203ENST00000465980 CCL15-CCL14A0A0B4J2E2 113 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 IRF6O14896 467 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 INPP5BP32019 993 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 G3BP1Q13283 466 aaKnown RBP eCLIP11.48□□□□□ -0.57
ATG3-203ENST00000465980 CCL15Q16663 113 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 PI16Q6UXB8 463 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 BRI3BPQ8WY22 251 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 PTPN18Q99952 460 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
ATG3-203ENST00000465980 CFHR5Q9BXR6 569 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 USP40Q9NVE5 1235 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 GMPR2Q9P2T1 348 aaKnown RBP11.48□□□□□ -0.57
ATG3-203ENST00000465980 AKAP2Q9Y2D5 859 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 SNCAIPQ9Y6H5 919 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 MAST2Q6P0Q8 1798 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 DOCK1Q14185 1865 aa11.48□□□□□ -0.57
ATG3-203ENST00000465980 CEP290O15078 2479 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 OS9Q13438 667 aaPredicted RBP11.47□□□□□ -0.57
ATG3-203ENST00000465980 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
ATG3-203ENST00000465980 DCAF15Q66K64 600 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 CHD1LQ86WJ1 897 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 ZFPM1Q8IX07 1006 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
ATG3-203ENST00000465980 FAM151AQ8WW52 585 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 ZNF341Q9BYN7 854 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 TRIM17Q9Y577 477 aa11.47□□□□□ -0.57
ATG3-203ENST00000465980 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 SPDYE5A6NIY4 337 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 RGS19P49795 217 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 RGS3P49796 1198 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 GTF2A2P52657 109 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
ATG3-203ENST00000465980 PKN2Q16513 984 aaKnown RBP11.46□□□□□ -0.57
ATG3-203ENST00000465980 ANKRD45Q5TZF3 282 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 ERO1BQ86YB8 467 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.57
ATG3-203ENST00000465980 CD99L2Q8TCZ2 262 aa11.46□□□□□ -0.57
ATG3-203ENST00000465980 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.57
ATG3-203ENST00000465980 MROH7-TTC4A0A0A0MT08 1334 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 GAKO14976 1311 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 RAB11FIP3O75154 756 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 SURF6O75683 361 aaKnown RBP11.45□□□□□ -0.58
ATG3-203ENST00000465980 SMPD1P17405 629 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 BTDP43251 543 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 PICALMQ13492 652 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 SPTY2D1Q68D10 685 aaPredicted RBP11.45□□□□□ -0.58
ATG3-203ENST00000465980 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
ATG3-203ENST00000465980 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 ERICH6Q7L0X2 663 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 OTOP1Q7RTM1 612 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 SKAP1Q86WV1 359 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 FAM43AQ8N2R8 423 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 EXOC6BQ9Y2D4 811 aa11.45□□□□□ -0.58
ATG3-203ENST00000465980 MGAMO43451 1857 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 PDS5AQ29RF7 1337 aaKnown RBP11.44□□□□□ -0.58
ATG3-203ENST00000465980 DOCK3Q8IZD9 2030 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 HOXA2O43364 376 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 CETPP11597 493 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 MECOMQ03112 1051 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 PPIL2Q13356 520 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 SNAPC2Q13487 334 aa11.44□□□□□ -0.58
ATG3-203ENST00000465980 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms