RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ZFYVE28Q9HCC9 887 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 PCMTD2Q9NV79 361 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 USTQ9Y2C2 406 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 NINLQ9Y2I6 1382 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 ANKRD26Q9UPS8 1709 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 SBF2Q86WG5 1849 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 FAM208AQ9UK61 1670 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 METTL12A8MUP2 240 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 SART1O43290 800 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 TGFB1P01137 390 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 POLR3DP05423 398 aaPredicted RBP6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 ECM1Q16610 540 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 RNF43Q68DV7 783 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 ZDHHC13Q8IUH4 622 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 POLR3GLQ9BT43 218 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 CRB1P82279 1406 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 NSD3Q9BZ95 1437 aa6.66□□□□□ -1.34
EXOSC3-204ENST00000465860 MEGF11A6BM72 1044 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 ICMTO60725 284 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 ESRRAP11474 423 aaPredicted RBP6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 BMP3P12645 472 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 SERPINB4P48594 390 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 EVA1CP58658 441 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 RRS1Q15050 365 aaKnown RBP6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 FDX2Q6P4F2 183 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 KRT27Q7Z3Y8 459 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 CLEC10AQ8IUN9 316 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 EGFL7Q9UHF1 273 aa6.65□□□□□ -1.34
EXOSC3-204ENST00000465860 ABCC6O95255 1503 aa6.65□□□□□ -1.35
EXOSC3-204ENST00000465860 SHANK3Q9BYB0 1731 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 SRCAPQ6ZRS2 3230 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 LOC100289279A0A1B0GTE1 492 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 DLGAP3O95886 979 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 KCNH5Q8NCM2 988 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 FAM83CQ9BQN1 747 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 DBNDD2Q9BQY9 259 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 USP26Q9BXU7 913 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 KCNF1Q9H3M0 494 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 KIF7Q2M1P5 1343 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 MAP3K19Q56UN5 1328 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 WDR17Q8IZU2 1322 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 DISP2A7MBM2 1401 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 RGPD1P0DJD0 1748 aa6.64□□□□□ -1.35
EXOSC3-204ENST00000465860 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 H3BRB1 525 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 TOM1L2Q6ZVM7 507 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 PTF1AQ7RTS3 328 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 DEFB132Q7Z7B7 95 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 TCP11L2Q8N4U5 519 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 ANKRD24Q8TF21 1146 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 COG3Q96JB2 828 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 TMPRSS13Q9BYE2 586 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 TUT1Q9H6E5 874 aaKnown RBP6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 SOX17Q9H6I2 414 aaPredicted RBP6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 PANK3Q9H999 370 aa6.63□□□□□ -1.35
EXOSC3-204ENST00000465860 A0A1W2PP55 124 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 PRR19A6NJB7 356 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 KIAA1324LA8MWY0 1029 aaPredicted RBP6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 COBLO75128 1261 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 HOXC9P31274 260 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 B4GALNT3Q6L9W6 998 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 GLYCTKQ8IVS8 523 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 GALNT12Q8IXK2 581 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 SMG8Q8ND04 991 aaKnown RBP6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 IP6K1Q92551 441 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 LTV1Q96GA3 475 aaPredicted RBP6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
EXOSC3-204ENST00000465860 BLMP54132 1417 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 WASHC2AQ641Q2 1341 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 A0A096LPE4 126 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 A0A1W2PPZ6 126 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 GAS2O43903 313 aaKnown RBP6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 TIAF1O95411 115 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 GRIA4P48058 902 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 ARHGAP4P98171 946 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 GSTM4Q03013 218 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 SPRED3Q2MJR0 410 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 SGO2Q562F6 1265 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 C12orf50Q8NA57 414 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 SHKBP1Q8TBC3 707 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 TCF12Q99081 682 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 NRSN2Q9GZP1 204 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 SUGCTQ9HAC7 445 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 BRPF3Q9ULD4 1205 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 RREB1Q92766 1687 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 KAT6BQ8WYB5 2073 aa6.61□□□□□ -1.35
EXOSC3-204ENST00000465860 NUP188Q5SRE5 1749 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 DRD2P14416 443 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 TNNT2P45379 298 aaPredicted RBP6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 ZNF423Q2M1K9 1284 aa6.6□□□□□ -1.35
EXOSC3-204ENST00000465860 HSP90AB2PQ58FF8 381 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms