RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 PLIN4Q96Q06 1357 aa24.1■■□□□ 1.45
PTCD3-206ENST00000465560 C19orf81C9J6K1 198 aa24.09■■□□□ 1.45
PTCD3-206ENST00000465560 FOXN1O15353 648 aa24.09■■□□□ 1.45
PTCD3-206ENST00000465560 TRPA1O75762 1119 aa24.09■■□□□ 1.45
PTCD3-206ENST00000465560 ANKRD23Q86SG2 305 aa24.09■■□□□ 1.45
PTCD3-206ENST00000465560 PROCA1Q8NCQ7 364 aaPredicted RBP24.09■■□□□ 1.45
PTCD3-206ENST00000465560 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.09■■□□□ 1.45
PTCD3-206ENST00000465560 CFHR5Q9BXR6 569 aa24.09■■□□□ 1.45
PTCD3-206ENST00000465560 TACC3Q9Y6A5 838 aa24.09■■□□□ 1.45
PTCD3-206ENST00000465560 ORC4O43929 436 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 PCP11498 1178 aaKnown RBP24.08■■□□□ 1.45
PTCD3-206ENST00000465560 HMGCS2P54868 508 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 ICA1Q05084 483 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 IMMTQ16891 758 aaKnown RBP24.08■■□□□ 1.45
PTCD3-206ENST00000465560 GADL1Q6ZQY3 521 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 KIAA1211Q6ZU35 1233 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 TBC1D10CQ8IV04 446 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 STAG1Q8WVM7 1258 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 KANSL2Q9H9L4 492 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 INCENPQ9NQS7 918 aa24.08■■□□□ 1.45
PTCD3-206ENST00000465560 U3KPZ7 1027 aaPredicted RBP24.08■■□□□ 1.45
PTCD3-206ENST00000465560 AKNAD1Q5T1N1 836 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 GPAT2Q6NUI2 795 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 CLEC10AQ8IUN9 316 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 ACER1Q8TDN7 264 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 MAP4K1Q92918 833 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 FEZ1Q99689 392 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 LSG1Q9H089 658 aaKnown RBP24.07■■□□□ 1.44
PTCD3-206ENST00000465560 KIAA1683Q9H0B3 1180 aa24.07■■□□□ 1.44
PTCD3-206ENST00000465560 RNF41Q9H4P4 317 aaPredicted RBP24.07■■□□□ 1.44
PTCD3-206ENST00000465560 TSPY3P0CV98 308 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 TSPY8P0CW00 308 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 DGKZQ13574 1117 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 MFSD6Q6ZSS7 791 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 NEDD1Q8NHV4 660 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 ARHGEF10LQ9HCE6 1279 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 TMOD4Q9NZQ9 345 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 AGTPBP1Q9UPW5 1226 aa24.06■■□□□ 1.44
PTCD3-206ENST00000465560 IGKV6D-41A0A0C4DH26 115 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 A0A1W2PRG0 241 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 HSPA8P11142 646 aaKnown RBP24.05■■□□□ 1.44
PTCD3-206ENST00000465560 CTCFP49711 727 aaPredicted RBP24.05■■□□□ 1.44
PTCD3-206ENST00000465560 USP14P54578 494 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 TFAP4Q01664 338 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 FAM47AQ5JRC9 791 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 USP17L2Q6R6M4 530 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 SIAH1Q8IUQ4 282 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 C12orf42Q96LP6 360 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 TSKSQ9UJT2 592 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 SLC45A1Q9Y2W3 748 aa24.05■■□□□ 1.44
PTCD3-206ENST00000465560 TSPY2A6NKD2 308 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 PDHXO00330 501 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 TAF1CQ15572 869 aaPredicted RBP24.04■■□□□ 1.44
PTCD3-206ENST00000465560 TREML2Q5T2D2 321 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 SH2D4AQ9H788 454 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 ANO2Q9NQ90 1003 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 TOMM22Q9NS69 142 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 EMILIN3Q9NT22 766 aa24.04■■□□□ 1.44
PTCD3-206ENST00000465560 RBM8AQ9Y5S9 174 aaKnown RBP24.04■■□□□ 1.44
PTCD3-206ENST00000465560 RANBP6O60518 1105 aaKnown RBP24.03■■□□□ 1.44
PTCD3-206ENST00000465560 TBC1D8O95759 1140 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 EEF2P13639 858 aaKnown RBP24.03■■□□□ 1.44
PTCD3-206ENST00000465560 NT5C2P49902 561 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 CRHR2Q13324 411 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 ZYXQ15942 572 aaKnown RBP24.03■■□□□ 1.44
PTCD3-206ENST00000465560 RRP12Q5JTH9 1297 aaKnown RBP24.03■■□□□ 1.44
PTCD3-206ENST00000465560 CEP95Q96GE4 821 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 TMX2Q9Y320 296 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 CASP8AP2Q9UKL3 1982 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 NEDD4P46934 1319 aa24.03■■□□□ 1.44
PTCD3-206ENST00000465560 CYP21A2P08686 494 aa24.02■■□□□ 1.44
PTCD3-206ENST00000465560 ZFYVE28Q9HCC9 887 aa24.02■■□□□ 1.44
PTCD3-206ENST00000465560 MTMR4Q9NYA4 1195 aa24.02■■□□□ 1.44
PTCD3-206ENST00000465560 NYAP2Q9P242 653 aa24.02■■□□□ 1.44
PTCD3-206ENST00000465560 ATP2B2Q01814 1243 aa24.01■■□□□ 1.43
PTCD3-206ENST00000465560 PABPC4Q13310 644 aaKnown RBP eCLIP24.01■■□□□ 1.43
PTCD3-206ENST00000465560 PARK7Q99497 189 aaKnown RBP24.01■■□□□ 1.43
PTCD3-206ENST00000465560 R3HDMLQ9H3Y0 253 aa24.01■■□□□ 1.43
PTCD3-206ENST00000465560 PARP14Q460N5 1801 aa24■■□□□ 1.43
PTCD3-206ENST00000465560 NOM1Q5C9Z4 860 aaKnown RBP24■■□□□ 1.43
PTCD3-206ENST00000465560 PPP4R3BQ5MIZ7 849 aa24■■□□□ 1.43
PTCD3-206ENST00000465560 ESR2Q92731 530 aa24■■□□□ 1.43
PTCD3-206ENST00000465560 PNMA3Q9UL41 463 aa24■■□□□ 1.43
PTCD3-206ENST00000465560 TTLL1O95922 423 aa23.99■■□□□ 1.43
PTCD3-206ENST00000465560 VCAM1P19320 739 aa23.99■■□□□ 1.43
PTCD3-206ENST00000465560 HOXA7P31268 230 aaPredicted RBP23.99■■□□□ 1.43
PTCD3-206ENST00000465560 LBX1P52954 281 aa23.99■■□□□ 1.43
PTCD3-206ENST00000465560 VCPKMTQ9H867 229 aa23.99■■□□□ 1.43
PTCD3-206ENST00000465560 CNNM2Q9H8M5 875 aa23.99■■□□□ 1.43
PTCD3-206ENST00000465560 IL17RBQ9NRM6 502 aa23.99■■□□□ 1.43
PTCD3-206ENST00000465560 TLR2O60603 784 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 NKX2-3Q8TAU0 364 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 LPAR1Q92633 364 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 MKL1Q969V6 931 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 KRT23Q9C075 422 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 TCP11L1Q9NUJ3 509 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 SYNPO2Q9UMS6 1093 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 ADGRA2Q96PE1 1338 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 RLFQ13129 1914 aa23.98■■□□□ 1.43
PTCD3-206ENST00000465560 GPR25O00155 361 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms