RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PASKQ96RG2 1323 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 PLIN4Q96Q06 1357 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 IFIT3O14879 490 aaKnown RBP19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 MCM4P33991 863 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 SEPT2Q15019 361 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 ARMC9Q7Z3E5 817 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 CEP95Q96GE4 821 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 TMEM87BQ96K49 555 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 MTA3Q9BTC8 594 aa19.86■□□□□ 0.77
EXOSC3-203ENST00000465229 ASNSP08243 561 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 CUL4AQ13619 759 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 SEC23AQ15436 765 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 RCSD1Q6JBY9 416 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 Q6ZUG5 572 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 CLEC10AQ8IUN9 316 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 ENAHQ8N8S7 591 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 ALDH8A1Q9H2A2 487 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 GBA2Q9HCG7 927 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 GINM1Q9NU53 330 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 MTMR4Q9NYA4 1195 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 TNKSO95271 1327 aa19.85■□□□□ 0.77
EXOSC3-203ENST00000465229 UBE2Q2LH0YL09 131 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 SH2B2O14492 632 aaPredicted RBP19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 NOVP48745 357 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 FKBP1BP68106 108 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 NUCB2P80303 420 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 SART3Q15020 963 aaKnown RBP19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 TMEM67Q5HYA8 995 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 LDLRAD1Q5T700 205 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 CLEC17AQ6ZS10 378 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 SIAH1Q8IUQ4 282 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 SCYL3Q8IZE3 742 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 FBXL16Q8N461 479 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 INTS4Q96HW7 963 aaKnown RBP19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 AGXT2Q9BYV1 514 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 KANSL2Q9H9L4 492 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 SENP2Q9HC62 589 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 VGLL4Q14135 290 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 CCDC178Q5BJE1 867 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 NOL9Q5SY16 702 aaKnown RBP19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 DGKHQ86XP1 1220 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 ANKS1AQ92625 1134 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 TMX3Q96JJ7 454 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 LY9Q9HBG7 655 aa19.84■□□□□ 0.77
EXOSC3-203ENST00000465229 ERICH2A1L162 156 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 AK2P54819 239 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 FGD1P98174 961 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 FSTL1Q12841 308 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 TOB2Q14106 344 aaPredicted RBP19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 CCDC84Q86UT8 332 aaPredicted RBP19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 ANKRD13AQ8IZ07 590 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 C2orf69Q8N8R5 385 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 STX8Q9UNK0 236 aa19.83■□□□□ 0.76
EXOSC3-203ENST00000465229 MYH8P13535 1937 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 DDX11L8A8MPP1 907 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 LIFRP42702 1097 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 WTAPQ15007 396 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 TNPO1Q92973 898 aaKnown RBP19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 BRF1Q92994 677 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 CLMNQ96JQ2 1002 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 GBP4Q96PP9 640 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 PICK1Q9NRD5 415 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 CSADQ9Y600 493 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 SNCAIPQ9Y6H5 919 aa19.82■□□□□ 0.76
EXOSC3-203ENST00000465229 TTLL1O95922 423 aa19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 EEF2P13639 858 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 PTPRAP18433 802 aa19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 PTMSP20962 102 aa19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 DEKP35659 375 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 ICA1Q05084 483 aa19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 IFIT1BQ5T764 474 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 LARP6Q9BRS8 491 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 NYAP2Q9P242 653 aa19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 CLIP2Q9UDT6 1046 aa19.81■□□□□ 0.76
EXOSC3-203ENST00000465229 USP17L5A8MUK1 530 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 SGMS1Q86VZ5 419 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 TMTC2Q8N394 836 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 MKL1Q969V6 931 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 TMEM47Q9BQJ4 181 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 GREB1LQ9C091 1923 aaPredicted RBP19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 A0A1W2PRG0 241 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 UNCXA6NJT0 531 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 PPP4R3BQ5MIZ7 849 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 ACER1Q8TDN7 264 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 BRPF3Q9ULD4 1205 aa19.8■□□□□ 0.76
EXOSC3-203ENST00000465229 TOP1P11387 765 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-203ENST00000465229 APOBRQ0VD83 1088 aa19.79■□□□□ 0.76
EXOSC3-203ENST00000465229 ANKRD1Q15327 319 aa19.79■□□□□ 0.76
EXOSC3-203ENST00000465229 ELP3Q9H9T3 547 aa19.79■□□□□ 0.76
EXOSC3-203ENST00000465229 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
EXOSC3-203ENST00000465229 ZHX2Q9Y6X8 837 aa19.79■□□□□ 0.76
EXOSC3-203ENST00000465229 EVCP57679 992 aa19.78■□□□□ 0.76
EXOSC3-203ENST00000465229 GSE1Q14687 1217 aa19.78■□□□□ 0.76
EXOSC3-203ENST00000465229 NFXL1Q6ZNB6 911 aa19.78■□□□□ 0.76
EXOSC3-203ENST00000465229 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
EXOSC3-203ENST00000465229 WDR18Q9BV38 432 aa19.78■□□□□ 0.76
EXOSC3-203ENST00000465229 TPCN1Q9ULQ1 816 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms