RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 DDX10Q13206 875 aaKnown RBP7.47□□□□□ -1.21
SSBP1-204ENST00000465167 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
SSBP1-204ENST00000465167 OLFM4Q6UX06 510 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 DPP8Q6V1X1 898 aaPredicted RBP7.47□□□□□ -1.21
SSBP1-204ENST00000465167 BTLAQ7Z6A9 289 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 ZNF34Q8IZ26 560 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 GIPC2Q8TF65 315 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 VPS33BQ9H267 617 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 TRMT112Q9UI30 125 aaKnown RBP7.47□□□□□ -1.21
SSBP1-204ENST00000465167 SH3TC1Q8TE82 1336 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 FANCIQ9NVI1 1328 aa7.47□□□□□ -1.21
SSBP1-204ENST00000465167 LAMB2P55268 1798 aa7.46□□□□□ -1.21
SSBP1-204ENST00000465167 GPR182O15218 404 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 MAN1A2O60476 641 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 INPP5BP32019 993 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 PLCB3Q01970 1234 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 FMR1Q06787 632 aaKnown RBP eCLIP7.46□□□□□ -1.22
SSBP1-204ENST00000465167 TNIP1Q15025 636 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 AOC3Q16853 763 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 COPS6Q7L5N1 327 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 TMC4Q7Z404 712 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 CNTROBQ8N137 903 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 XAGE3Q8WTP9 111 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 ALKBH8Q96BT7 664 aaKnown RBP7.46□□□□□ -1.22
SSBP1-204ENST00000465167 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 GPAMQ9HCL2 828 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 DDX21Q9NR30 783 aaKnown RBP eCLIP7.46□□□□□ -1.22
SSBP1-204ENST00000465167 TRPM7Q96QT4 1865 aa7.46□□□□□ -1.22
SSBP1-204ENST00000465167 E9PSI1 815 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 BBOX1O75936 387 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 ANXA1P04083 346 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 P4HBP07237 508 aaKnown RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 HOXB7P09629 217 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 PCSK2P16519 638 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 ECE1P42892 770 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 CTCFP49711 727 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 ARSDP51689 593 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 TAGLNQ01995 201 aaKnown RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 DEFB115Q30KQ5 88 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 USP50Q70EL3 339 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 PIK3R5Q8WYR1 880 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 RUBCNLQ9H714 662 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-204ENST00000465167 ATP6V0A2Q9Y487 856 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 ADAMTSL1Q8N6G6 1762 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 ABCC4O15439 1325 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 PASKQ96RG2 1323 aa7.45□□□□□ -1.22
SSBP1-204ENST00000465167 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
SSBP1-204ENST00000465167 SOBPA7XYQ1 873 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 RPLP1P05386 114 aaKnown RBP7.44□□□□□ -1.22
SSBP1-204ENST00000465167 HCLS1P14317 486 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-204ENST00000465167 MAP2K1Q02750 393 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-204ENST00000465167 EHHADHQ08426 723 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 TCIRG1Q13488 830 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 GRAPQ13588 217 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 SLC10A5Q5PT55 438 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 NLRP10Q86W26 655 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 NLRP8Q86W28 1048 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 SP8Q8IXZ3 490 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 PGBD3Q8N328 593 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 PLBD2Q8NHP8 589 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 GRAPLQ8TC17 118 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-204ENST00000465167 NIF3L1Q9GZT8 377 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 ADARB2Q9NS39 739 aaKnown RBP7.44□□□□□ -1.22
SSBP1-204ENST00000465167 HYPKQ9NX55 129 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 CHPF2Q9P2E5 772 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 ZNRF3Q9ULT6 936 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 CDHR2Q9BYE9 1310 aa7.44□□□□□ -1.22
SSBP1-204ENST00000465167 SLC35F4A4IF30 521 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 H7C1D1 291 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 CHL1O00533 1208 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 DDX58O95786 925 aaKnown RBP7.43□□□□□ -1.22
SSBP1-204ENST00000465167 VEGFBP49765 207 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 PTSQ03393 145 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 TYRO3Q06418 890 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 GRM1Q13255 1194 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 PROSER3Q2NL68 480 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 EYA3Q99504 573 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 SNED1Q8TER0 1413 aa7.43□□□□□ -1.22
SSBP1-204ENST00000465167 A6NHS1 94 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 RASSF10A6NK89 507 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 FOXN1O15353 648 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
SSBP1-204ENST00000465167 EPS15P42566 896 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 KIAA2012Q0VF49 1180 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 LBRQ14739 615 aaKnown RBP7.42□□□□□ -1.22
SSBP1-204ENST00000465167 C8orf34Q49A92 452 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 EFHC2Q5JST6 749 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 DUSP27Q5VZP5 1158 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 TTC16Q8NEE8 873 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 KIFC2Q96AC6 838 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 CEP63Q96MT8 703 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 RTFDC1Q9BY42 306 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-204ENST00000465167 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms